| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080446
Identifier: 227080446
GI number: 227080446
Start: 217863
End: 217958
Strand: Reverse
Name: 227080446
Synonym: VCM66_0214
Alternate gene names: NA
Gene position: 217958-217863 (Counterclockwise)
Preceding gene: 227080449
Following gene: 227080445
Centisome position: 7.54
GC content: 39.58
Gene sequence:
>96_bases TTGCAGTTTTGCTCTGCATCTGGCGTGCTGCATTTTACATTTTCTGGTCAGCTCTGCATAATTCTGGCTCAATTATCGAA TAGTTTTATCGAATAG
Upstream 100 bases:
>100_bases CTTGGGTCTTCATGCAAAAGCGCGTCGTCAAACCAAACTTTCTGCTGCGCGTCGTTGAACGTCTGTATCAAGGGGCGATT CCTATCGTTATCCGGTAGTT
Downstream 100 bases:
>100_bases GCTTGGCTATGGCATTGTTTCAATCAGCCCCACACTCCCTCTGTATCCTGCGTTTATCGGCGATTGGTGATGTCTGTAAT ACGATAGCTGCCGTACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 31; Mature: 31
Protein sequence:
>31_residues MQFCSASGVLHFTFSGQLCIILAQLSNSFIE
Sequences:
>Translated_31_residues MQFCSASGVLHFTFSGQLCIILAQLSNSFIE >Mature_31_residues MQFCSASGVLHFTFSGQLCIILAQLSNSFIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3393; Mature: 3393
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFCSASGVLHFTFSGQLCIILAQLSNSFIE CCCCCCCCEEEEEECCCEEEEEEEHHHHCCC >Mature Secondary Structure MQFCSASGVLHFTFSGQLCIILAQLSNSFIE CCCCCCCCEEEEEECCCEEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA