Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

Click here to switch to the map view.

The map label for this gene is ypeA [C]

Identifier: 227080342

GI number: 227080342

Start: 101923

End: 102354

Strand: Direct

Name: ypeA [C]

Synonym: VCM66_0106

Alternate gene names: 227080342

Gene position: 101923-102354 (Clockwise)

Preceding gene: 227080341

Following gene: 227080344

Centisome position: 3.52

GC content: 43.06

Gene sequence:

>432_bases
ATGATGTTAATTCGTGAAGGTTCCCTGAGTGAAATTGTACAAATCGTTGAAAAAATTCATGAGTTTGCGCAGAAAGAGAC
GGAACAGAGCTTACAAGCTAGGCTGAACGATAAGACTTGCTTAGTGCTCGTTGCAGAAAATGAGAGCGAATTGCTAGGTT
TTAAAATGGGTTACGAGCTCGATAATAAAACGTTCTACAGCTGGTTTGGTGGTGTGACTCCTGCCGCACGAGGGCATGGT
GTCGCGCAGCGCTTACTTGACGTGCAAGAAAAATGGGCGTTAGAGCAGGGGTATCAACGTATCAAAGTGAAATCGCGTAA
TCAGTTTCCCGCCATGTTACGGTTGTTGATAAAAAATGGTTATCTCATTGAGGATTATGAGAAAAAGGAATCCATCATCG
AGAGCCGAATCCACTTTGTTAAAGTGCTCTAA

Upstream 100 bases:

>100_bases
ATACACCGCGCTAATAAAGCAAAGCTCAAGGCTGACGTAAGTCAGCCTTTTTAACATCTCTAAACCACTGTTTTTAGCGA
TGGCGATTGTTTGAGGAAAA

Downstream 100 bases:

>100_bases
AAAATAAATGAGATTTTTTCTCATTTGGGTGTTGACTATTAAATGAGAACTATTATTATTAACCACGTCTTAGGGAACAA
GTGAAGGTTCACCAGGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family Protein; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYELDNKTFYSWFGGVTPAARGHG
VAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNGYLIEDYEKKESIIESRIHFVKVL

Sequences:

>Translated_143_residues
MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYELDNKTFYSWFGGVTPAARGHG
VAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNGYLIEDYEKKESIIESRIHFVKVL
>Mature_143_residues
MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYELDNKTFYSWFGGVTPAARGHG
VAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNGYLIEDYEKKESIIESRIHFVKVL

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.- [C]

Molecular weight: Translated: 16590; Mature: 16590

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYEL
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHEEHCCCEEC
DNKTFYSWFGGVTPAARGHGVAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNG
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
YLIEDYEKKESIIESRIHFVKVL
CEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYEL
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHEEHCCCEEC
DNKTFYSWFGGVTPAARGHGVAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNG
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
YLIEDYEKKESIIESRIHFVKVL
CEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA