Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
---|---|
Accession | NC_012578 |
Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is ypeA [C]
Identifier: 227080342
GI number: 227080342
Start: 101923
End: 102354
Strand: Direct
Name: ypeA [C]
Synonym: VCM66_0106
Alternate gene names: 227080342
Gene position: 101923-102354 (Clockwise)
Preceding gene: 227080341
Following gene: 227080344
Centisome position: 3.52
GC content: 43.06
Gene sequence:
>432_bases ATGATGTTAATTCGTGAAGGTTCCCTGAGTGAAATTGTACAAATCGTTGAAAAAATTCATGAGTTTGCGCAGAAAGAGAC GGAACAGAGCTTACAAGCTAGGCTGAACGATAAGACTTGCTTAGTGCTCGTTGCAGAAAATGAGAGCGAATTGCTAGGTT TTAAAATGGGTTACGAGCTCGATAATAAAACGTTCTACAGCTGGTTTGGTGGTGTGACTCCTGCCGCACGAGGGCATGGT GTCGCGCAGCGCTTACTTGACGTGCAAGAAAAATGGGCGTTAGAGCAGGGGTATCAACGTATCAAAGTGAAATCGCGTAA TCAGTTTCCCGCCATGTTACGGTTGTTGATAAAAAATGGTTATCTCATTGAGGATTATGAGAAAAAGGAATCCATCATCG AGAGCCGAATCCACTTTGTTAAAGTGCTCTAA
Upstream 100 bases:
>100_bases ATACACCGCGCTAATAAAGCAAAGCTCAAGGCTGACGTAAGTCAGCCTTTTTAACATCTCTAAACCACTGTTTTTAGCGA TGGCGATTGTTTGAGGAAAA
Downstream 100 bases:
>100_bases AAAATAAATGAGATTTTTTCTCATTTGGGTGTTGACTATTAAATGAGAACTATTATTATTAACCACGTCTTAGGGAACAA GTGAAGGTTCACCAGGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family Protein; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYELDNKTFYSWFGGVTPAARGHG VAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNGYLIEDYEKKESIIESRIHFVKVL
Sequences:
>Translated_143_residues MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYELDNKTFYSWFGGVTPAARGHG VAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNGYLIEDYEKKESIIESRIHFVKVL >Mature_143_residues MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYELDNKTFYSWFGGVTPAARGHG VAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNGYLIEDYEKKESIIESRIHFVKVL
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 16590; Mature: 16590
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYEL CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHEEHCCCEEC DNKTFYSWFGGVTPAARGHGVAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNG CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC YLIEDYEKKESIIESRIHFVKVL CEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMLIREGSLSEIVQIVEKIHEFAQKETEQSLQARLNDKTCLVLVAENESELLGFKMGYEL CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHEEHCCCEEC DNKTFYSWFGGVTPAARGHGVAQRLLDVQEKWALEQGYQRIKVKSRNQFPAMLRLLIKNG CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC YLIEDYEKKESIIESRIHFVKVL CEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA