Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
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Accession | NC_012578 |
Length | 2,892,523 |
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The map label for this gene is tatA
Identifier: 227080322
GI number: 227080322
Start: 84733
End: 84981
Strand: Direct
Name: tatA
Synonym: VCM66_0086
Alternate gene names: 227080322
Gene position: 84733-84981 (Clockwise)
Preceding gene: 227080321
Following gene: 227080323
Centisome position: 2.93
GC content: 44.58
Gene sequence:
>249_bases ATGGGTGGTATCAGTATTTGGCAACTTCTTATCATTGCAGTGATCGTGGTATTGCTGTTTGGCACTAAGAAACTGCGTGG TATTGGCAGTGATTTGGGCAGCGCGGTCAAAGGCTTTAAGAAAGCCATGTCGGAAGAAGAGTCAAACAGCGCAGCAAATC AGAAAGATGCTGACTTCGAAACCAAAAATCTTGAGCAGGCCAAAACCAATGCGTCTGCTGAAGTGAAAAAAGACAAAGAG CAGGCATAA
Upstream 100 bases:
>100_bases TGTTATGTTGGCTATTGAGTTGGCGAGCTTATCGCCAGTAAGCGCCTTGTCGCGTCGATAAGTTCGAAGATTTGTTCACA CATAACCCGAGGTAAAAGAG
Downstream 100 bases:
>100_bases GTCGTGTTTGATATCGGTTTTTGGGAACTGGTATTGATCGCTATTGTGGCGCTGGTGGTGCTTGGCCCTGAGCGATTACC CCATGCGATTCGCAGCGTGG
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MGGISIWQLLIIAVIVVLLFGTKKLRGIGSDLGSAVKGFKKAMSEEESNSAANQKDADFETKNLEQAKTNASAEVKKDKE QA
Sequences:
>Translated_82_residues MGGISIWQLLIIAVIVVLLFGTKKLRGIGSDLGSAVKGFKKAMSEEESNSAANQKDADFETKNLEQAKTNASAEVKKDKE QA >Mature_81_residues GGISIWQLLIIAVIVVLLFGTKKLRGIGSDLGSAVKGFKKAMSEEESNSAANQKDADFETKNLEQAKTNASAEVKKDKEQ A
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=90, Percent_Identity=61.1111111111111, Blast_Score=99, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_VIBCH (P57051)
Other databases:
- EMBL: AE003852 - PIR: G82366 - RefSeq: NP_229745.1 - GeneID: 2614860 - GenomeReviews: AE003852_GR - KEGG: vch:VC0086 - TIGR: VC_0086 - HOGENOM: HBG751935 - OMA: FTSIWHW - ProtClustDB: PRK04598 - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 8797; Mature: 8666
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x244fa0b0)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGISIWQLLIIAVIVVLLFGTKKLRGIGSDLGSAVKGFKKAMSEEESNSAANQKDADFE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TKNLEQAKTNASAEVKKDKEQA HHHHHHHHHCCHHHHHHCCCCH >Mature Secondary Structure GGISIWQLLIIAVIVVLLFGTKKLRGIGSDLGSAVKGFKKAMSEEESNSAANQKDADFE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TKNLEQAKTNASAEVKKDKEQA HHHHHHHHHCCHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301