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The map label for this gene is uspB

Identifier: 227080315

GI number: 227080315

Start: 77368

End: 77691

Strand: Direct

Name: uspB

Synonym: VCM66_0079

Alternate gene names: 227080315

Gene position: 77368-77691 (Clockwise)

Preceding gene: 227080314

Following gene: 227080316

Centisome position: 2.67

GC content: 47.53

Gene sequence:

>324_bases
ATGATCAGTGGAGATACCATTCTATTTGCGCTTATGCTCGTGACTGCGATTAATGTAGCACGTTATGTGACAGCGCTGCG
CTCGCTTATTTACATCATGCGTGAAGCTCACCCGCTCCTTTATCAACAAGTCGATGGGCGCGGCTTTTTCACCACCCATG
GCAATGTGACTAAGCAGGTGCGTTTATACCATTACCTGAAAAGTCGTGAGTATCACCACCATCATGATCCTGTGTTTACT
GGTAAGTGCGATCGGGTACGTGAGCTGTTCATTTTATCGGGTTCACTGTTGGTGCTCACCACTGTCGTCGCGTTTATGCT
TTAG

Upstream 100 bases:

>100_bases
TGTCATGGATGCCCCTGCTGAGTAAGATCAGCAAAAAGACAAACTGAAGCGATCGTCTTTTTCTCTGGGCATTCTCAACA
CAAGATGTAGGGAGGAAAAG

Downstream 100 bases:

>100_bases
TGCGCCGGAGAGCTTTTCGAATGCGGTTTGCCAACACGTGCATTGCGTTGGCAGAGTAGCGATTTGCCGTTAGAATAGCC
GCCCAAGTGAGTAAGGATGT

Product: universal stress protein UspB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MISGDTILFALMLVTAINVARYVTALRSLIYIMREAHPLLYQQVDGRGFFTTHGNVTKQVRLYHYLKSREYHHHHDPVFT
GKCDRVRELFILSGSLLVLTTVVAFML

Sequences:

>Translated_107_residues
MISGDTILFALMLVTAINVARYVTALRSLIYIMREAHPLLYQQVDGRGFFTTHGNVTKQVRLYHYLKSREYHHHHDPVFT
GKCDRVRELFILSGSLLVLTTVVAFML
>Mature_107_residues
MISGDTILFALMLVTAINVARYVTALRSLIYIMREAHPLLYQQVDGRGFFTTHGNVTKQVRLYHYLKSREYHHHHDPVFT
GKCDRVRELFILSGSLLVLTTVVAFML

Specific function: Not Known. Overexpression Of Uspb Causes Cell Death In Stationary Phase, Whereas Mutants Of Uspb Are Sensitive To Exposure To Ethanol But Not Heat In Stationary Phase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein B family

Homologues:

Organism=Escherichia coli, GI1789908, Length=109, Percent_Identity=46.7889908256881, Blast_Score=107, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): USPB_VIBC3 (A5F4E9)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- STRING:   A5F4E9
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A2436
- eggNOG:   NOG05863
- HOGENOM:   HBG303496
- OMA:   CERVRGQ
- ProtClustDB:   PRK04960
- BioCyc:   VCHO345073:VC0395_A2436-MONOMER
- HAMAP:   MF_01088
- InterPro:   IPR019598

Pfam domain/function: PF10625 UspB

EC number: NA

Molecular weight: Translated: 12338; Mature: 12338

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x24446d68)-; HASH(0x2473c800)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGDTILFALMLVTAINVARYVTALRSLIYIMREAHPLLYQQVDGRGFFTTHGNVTKQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCHHHHH
RLYHYLKSREYHHHHDPVFTGKCDRVRELFILSGSLLVLTTVVAFML
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
>Mature Secondary Structure
MISGDTILFALMLVTAINVARYVTALRSLIYIMREAHPLLYQQVDGRGFFTTHGNVTKQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCHHHHH
RLYHYLKSREYHHHHDPVFTGKCDRVRELFILSGSLLVLTTVVAFML
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA