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The map label for this gene is 227080259

Identifier: 227080259

GI number: 227080259

Start: 20235

End: 20837

Strand: Direct

Name: 227080259

Synonym: VCM66_0022

Alternate gene names: NA

Gene position: 20235-20837 (Clockwise)

Preceding gene: 227080255

Following gene: 227080260

Centisome position: 0.7

GC content: 47.1

Gene sequence:

>603_bases
TTGTTTGTCTACGGTTCGATAATAAATCCCTGTCCCACAGAGCATGTCATGAGCGTTTTAGCTATTTCGATTACTACTGT
GGCTTTAGCCGAGATCGGGGATAAAACCCAACTGTTATCCTTGTTACTCGCCAGCCGTTACCGTAAACCCATTCCGATTA
TTGCCGCCATTTTTCTTGCGACGTTAGCCAATCATGCACTGGCCGCTTGGTTAGGTGTGGTGGTGGCGGATTATCTTTCT
CCCGACATTTTAAAATGGGTGTTGGTGGTCAGTTTCCTTGCGATGGCGGGTTGGATTCTCATCCCAGATAAATTGGATGG
AGAAGAGTCTATCTCTACTCGCGGTCCTTTTGTGGCAAGTTTTATTGCCTTCTTTATGGCTGAAATTGGCGATAAAACCC
AAATTGCCACCTCGATTTTAGGGGCGCAGTATGCCGATGCCCTCAGTTGGGTGATTGTTGGGACGACCTTAGGTATGTTG
CTTGCGAATGTTCCAGTGGTGCTGATTGGTAAATTGTCCGCCGACAAAATGCCGCTGGGTTTGATCCGTAAAGTAACGGC
AGGGTTATTCTTGCTAATGGCACTGGCTACGGCGTTTTTTTGA

Upstream 100 bases:

>100_bases
CATCAACATATTTGGTACTCAATTACCATGGTGTGTGAGACCTGAGCCTTCAGGTTTAGCAAGACCTTAGACAAACAACG
CGAACTGGGATAGGGCGTGA

Downstream 100 bases:

>100_bases
GTCGTAACGCGCGGATTTCGACTGTGCAGCGTGACCTATCACCCATCCTGATGTGGATTATCATGCTAGGGTATGAGCAG
GGTTCAAGAGTAAGAGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MFVYGSIINPCPTEHVMSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVADYLS
PDILKWVLVVSFLAMAGWILIPDKLDGEESISTRGPFVASFIAFFMAEIGDKTQIATSILGAQYADALSWVIVGTTLGML
LANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMALATAFF

Sequences:

>Translated_200_residues
MFVYGSIINPCPTEHVMSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVADYLS
PDILKWVLVVSFLAMAGWILIPDKLDGEESISTRGPFVASFIAFFMAEIGDKTQIATSILGAQYADALSWVIVGTTLGML
LANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMALATAFF
>Mature_200_residues
MFVYGSIINPCPTEHVMSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVADYLS
PDILKWVLVVSFLAMAGWILIPDKLDGEESISTRGPFVASFIAFFMAEIGDKTQIATSILGAQYADALSWVIVGTTLGML
LANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMALATAFF

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21350; Mature: 21350

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVYGSIINPCPTEHVMSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLA
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
TLANHALAAWLGVVVADYLSPDILKWVLVVSFLAMAGWILIPDKLDGEESISTRGPFVAS
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCHHHH
FIAFFMAEIGDKTQIATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH
LIRKVTAGLFLLMALATAFF
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFVYGSIINPCPTEHVMSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLA
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
TLANHALAAWLGVVVADYLSPDILKWVLVVSFLAMAGWILIPDKLDGEESISTRGPFVAS
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCHHHH
FIAFFMAEIGDKTQIATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH
LIRKVTAGLFLLMALATAFF
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA