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The map label for this gene is yniC [C]

Identifier: 226951007

GI number: 226951007

Start: 4065351

End: 4065995

Strand: Direct

Name: yniC [C]

Synonym: CLM_4044

Alternate gene names: 226951007

Gene position: 4065351-4065995 (Clockwise)

Preceding gene: 226951006

Following gene: 226951008

Centisome position: 97.84

GC content: 25.89

Gene sequence:

>645_bases
TTGAAAAATATAGAGGGAGCAATTTTTGATTTAGATGGGACATTAATAGATTCTATGGGAATATGGGAAAAAATAGACTA
TGATTTTTTAAATAAAAGGAACTTAAAGGTTCCTCAAGATTTAAAAGATAAAATAGGAACTCTTACCTTTGAGGAAGGGG
CTAATTTTTTCAAAAAAAACTTTAAACTAAAAGAATCGCAAGAAGAAATTTTAAAAGAGTGGCATAACATGGTAGTTAAA
GAATATTCTCATAACATAAAATTGAAAAATAATGTGAGGGATTTTCTTATAAAATTAAAAAATAAAGGAGTAAAGTTGGC
TATTGCTACAAGTAATACTCCCGAACTAACTAAATTAGTATTAGAAAATAATAAAATATTGGATTTATTTGATTCCATAA
CAACTATTAGTGAAGTTAATAGAAATAAAACCTTTCCTGATATATATCTTTTATGCGCAAAAAAACTAAAGCTTCCTGCT
GAAAAATGTGCTGTATTTGAAGATATACTTCCTGCCATAAAAAGTGCTAAAACGGCTAAAATGAAAACCATTGGAATTTA
CGATGATTCATCTAAAGATGATGAAAATAAAATAAAGGAAATAGCGGATTATTATATTTATGACTATAAAGAATTAATAA
TATAA

Upstream 100 bases:

>100_bases
GAAAGAAAATTTTAAAATATTTAGAATATAATATATAAATTTTATTTTTTATAAACACCCTGTTATAATTTTATTAGTAT
ATTGTAATGGGGTGATTTCT

Downstream 100 bases:

>100_bases
ATTTATCCGATGACTACCCGCTCTAATACTCCCATCGCACTCTGTGAAAGCGATTCGCACCAAATCGAAGATTTGGACTC
TCTGCTTTTCTTCAAAGTGG

Product: haloacid dehalogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKNIEGAIFDLDGTLIDSMGIWEKIDYDFLNKRNLKVPQDLKDKIGTLTFEEGANFFKKNFKLKESQEEILKEWHNMVVK
EYSHNIKLKNNVRDFLIKLKNKGVKLAIATSNTPELTKLVLENNKILDLFDSITTISEVNRNKTFPDIYLLCAKKLKLPA
EKCAVFEDILPAIKSAKTAKMKTIGIYDDSSKDDENKIKEIADYYIYDYKELII

Sequences:

>Translated_214_residues
MKNIEGAIFDLDGTLIDSMGIWEKIDYDFLNKRNLKVPQDLKDKIGTLTFEEGANFFKKNFKLKESQEEILKEWHNMVVK
EYSHNIKLKNNVRDFLIKLKNKGVKLAIATSNTPELTKLVLENNKILDLFDSITTISEVNRNKTFPDIYLLCAKKLKLPA
EKCAVFEDILPAIKSAKTAKMKTIGIYDDSSKDDENKIKEIADYYIYDYKELII
>Mature_214_residues
MKNIEGAIFDLDGTLIDSMGIWEKIDYDFLNKRNLKVPQDLKDKIGTLTFEEGANFFKKNFKLKESQEEILKEWHNMVVK
EYSHNIKLKNNVRDFLIKLKNKGVKLAIATSNTPELTKLVLENNKILDLFDSITTISEVNRNKTFPDIYLLCAKKLKLPA
EKCAVFEDILPAIKSAKTAKMKTIGIYDDSSKDDENKIKEIADYYIYDYKELII

Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=192, Percent_Identity=28.6458333333333, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1788021, Length=213, Percent_Identity=23.0046948356808, Blast_Score=76, Evalue=2e-15,
Organism=Drosophila melanogaster, GI20129151, Length=212, Percent_Identity=33.0188679245283, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116008157, Length=194, Percent_Identity=23.7113402061856, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24781; Mature: 24781

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIEGAIFDLDGTLIDSMGIWEKIDYDFLNKRNLKVPQDLKDKIGTLTFEEGANFFKKN
CCCCCCEEEECCCHHHHCCCCHHHCCHHHHCCCCCCCCHHHHHHHCCEEHHHHHHHHHHC
FKLKESQEEILKEWHNMVVKEYSHNIKLKNNVRDFLIKLKNKGVKLAIATSNTPELTKLV
CCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH
LENNKILDLFDSITTISEVNRNKTFPDIYLLCAKKLKLPAEKCAVFEDILPAIKSAKTAK
HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH
MKTIGIYDDSSKDDENKIKEIADYYIYDYKELII
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNIEGAIFDLDGTLIDSMGIWEKIDYDFLNKRNLKVPQDLKDKIGTLTFEEGANFFKKN
CCCCCCEEEECCCHHHHCCCCHHHCCHHHHCCCCCCCCHHHHHHHCCEEHHHHHHHHHHC
FKLKESQEEILKEWHNMVVKEYSHNIKLKNNVRDFLIKLKNKGVKLAIATSNTPELTKLV
CCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH
LENNKILDLFDSITTISEVNRNKTFPDIYLLCAKKLKLPAEKCAVFEDILPAIKSAKTAK
HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH
MKTIGIYDDSSKDDENKIKEIADYYIYDYKELII
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]