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The map label for this gene is zntR [C]

Identifier: 226950808

GI number: 226950808

Start: 3862237

End: 3862659

Strand: Direct

Name: zntR [C]

Synonym: CLM_3819

Alternate gene names: 226950808

Gene position: 3862237-3862659 (Clockwise)

Preceding gene: 226950804

Following gene: 226950820

Centisome position: 92.95

GC content: 34.04

Gene sequence:

>423_bases
GTGAACTATACCATATCACAAACCGCTAAACAAATGAATTTAACAATATATACATTGAGATACTATGACCGTGAGGGACT
GCTCTCTAATGTTAAAAGGGATAAATCAGGTAACCGTATTTTTACCAGAGATAATATGGAGATGCTCTCACTTATATGCT
GCCTTAAGAATACTGGAATGCCTATTAAGGAAATAAAGCAATTTACAGACTGGCAGAATAAAGGTAATCATACCCTTCAT
GACCGTAACGATATGTTAGTAAAACATAAAGAAGATATTTTAAAGCAAATCGAAGATTTAAAAAAACATCTTCGTTTGAT
TGATCGAAAGCTCGATTATTACCATGATGCCTGCCAGGCCTATGATACTGACTCACCAATTCCAACTTGTTGCGAATATA
CAGATAATGATTCAGAATTTTAG

Upstream 100 bases:

>100_bases
AGCAAATATAACCTTACACTTAACAATTTTCATAATCATCCTTGACTTAGAGTTAAATGTAGGTTATATAATATATAAAA
AACTATTTGAGGTGATAAAC

Downstream 100 bases:

>100_bases
GTTTAATTTTAACATTTACTGCGTAACTCCTTTCGGCTCTTGTCGAACACTATATCTCTACTTAATATCATGTCAAATCA
TAGCTTAACGTTATTTAAAT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNYTISQTAKQMNLTIYTLRYYDREGLLSNVKRDKSGNRIFTRDNMEMLSLICCLKNTGMPIKEIKQFTDWQNKGNHTLH
DRNDMLVKHKEDILKQIEDLKKHLRLIDRKLDYYHDACQAYDTDSPIPTCCEYTDNDSEF

Sequences:

>Translated_140_residues
MNYTISQTAKQMNLTIYTLRYYDREGLLSNVKRDKSGNRIFTRDNMEMLSLICCLKNTGMPIKEIKQFTDWQNKGNHTLH
DRNDMLVKHKEDILKQIEDLKKHLRLIDRKLDYYHDACQAYDTDSPIPTCCEYTDNDSEF
>Mature_140_residues
MNYTISQTAKQMNLTIYTLRYYDREGLLSNVKRDKSGNRIFTRDNMEMLSLICCLKNTGMPIKEIKQFTDWQNKGNHTLH
DRNDMLVKHKEDILKQIEDLKKHLRLIDRKLDYYHDACQAYDTDSPIPTCCEYTDNDSEF

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16677; Mature: 16677

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYTISQTAKQMNLTIYTLRYYDREGLLSNVKRDKSGNRIFTRDNMEMLSLICCLKNTGM
CCCCHHHHHHHHCEEEEEEEEECHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCC
PIKEIKQFTDWQNKGNHTLHDRNDMLVKHKEDILKQIEDLKKHLRLIDRKLDYYHDACQA
CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDTDSPIPTCCEYTDNDSEF
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNYTISQTAKQMNLTIYTLRYYDREGLLSNVKRDKSGNRIFTRDNMEMLSLICCLKNTGM
CCCCHHHHHHHHCEEEEEEEEECHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCC
PIKEIKQFTDWQNKGNHTLHDRNDMLVKHKEDILKQIEDLKKHLRLIDRKLDYYHDACQA
CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDTDSPIPTCCEYTDNDSEF
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]