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The map label for this gene is 226950606

Identifier: 226950606

GI number: 226950606

Start: 3626832

End: 3627419

Strand: Direct

Name: 226950606

Synonym: CLM_3590

Alternate gene names: NA

Gene position: 3626832-3627419 (Clockwise)

Preceding gene: 226950605

Following gene: 226950607

Centisome position: 87.28

GC content: 28.57

Gene sequence:

>588_bases
ATGGAAAAAACAAGATTTAAAGGAAGTGCTATGTTAAATCCTGTTCCAGTAGCACTAATAACTACTAAAAATAATGAAAA
AACTAATGTATTCACTGTAGGTTGGATTGGAACAGCATGCACTAAACCCCCTATAATAAGCATAGCTATAAGACCTGAAA
GGCTTTCTTTTCATTATCTAAAAGATAACCCAGAATTAGTGGTTAACCTTCCCTCTAATAATCTTGTTAAATTAGTAGAT
TATTGTGGTGTTCGTTCTGGTAAAACTAATGATAAAATAAAAGAATGTAATTTTACACTAAAAAATTCAAATGAAATAAG
TGTTCCTTATATAGAACAATGTCCTATAAATCTAGAATGTAAGGTTATAAATATATTACCTTTAGGAACTCATCATTTAT
TTTTATGCGAAGTACTTTGTACCAATATAAATGATGAGTTAATAGACCAAAAAGGCAAAATTCATTTTGAAAAAGCGAAC
CTAATTTCTTATTCTCATGGAGAATACTATGCCCTGCCACAAAAATCTTTAGGCAAATTTGGATTCTCTGTACAAAAAAA
GAAGAAAAAAAAGAAGTTTAATAGATAA

Upstream 100 bases:

>100_bases
GGATTAATCCTTATATCTATAATAGAAAAGAATAAGAAACTTATGTCTTATTTTAAATATTAATTCTAAAAATATAAAAT
TTACCAAGGAGAGAACGCAT

Downstream 100 bases:

>100_bases
TTTTTATTATGTTATAAAAGCCTCCTGCATACATTAATATAAAGGGGGGTCTTTTTTATGTCTAATTTTAAAAAACTATT
TTATACATTAATCTTTATAC

Product: putative flavin reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MEKTRFKGSAMLNPVPVALITTKNNEKTNVFTVGWIGTACTKPPIISIAIRPERLSFHYLKDNPELVVNLPSNNLVKLVD
YCGVRSGKTNDKIKECNFTLKNSNEISVPYIEQCPINLECKVINILPLGTHHLFLCEVLCTNINDELIDQKGKIHFEKAN
LISYSHGEYYALPQKSLGKFGFSVQKKKKKKKFNR

Sequences:

>Translated_195_residues
MEKTRFKGSAMLNPVPVALITTKNNEKTNVFTVGWIGTACTKPPIISIAIRPERLSFHYLKDNPELVVNLPSNNLVKLVD
YCGVRSGKTNDKIKECNFTLKNSNEISVPYIEQCPINLECKVINILPLGTHHLFLCEVLCTNINDELIDQKGKIHFEKAN
LISYSHGEYYALPQKSLGKFGFSVQKKKKKKKFNR
>Mature_195_residues
MEKTRFKGSAMLNPVPVALITTKNNEKTNVFTVGWIGTACTKPPIISIAIRPERLSFHYLKDNPELVVNLPSNNLVKLVD
YCGVRSGKTNDKIKECNFTLKNSNEISVPYIEQCPINLECKVINILPLGTHHLFLCEVLCTNINDELIDQKGKIHFEKAN
LISYSHGEYYALPQKSLGKFGFSVQKKKKKKKFNR

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22111; Mature: 22111

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTRFKGSAMLNPVPVALITTKNNEKTNVFTVGWIGTACTKPPIISIAIRPERLSFHYL
CCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEE
KDNPELVVNLPSNNLVKLVDYCGVRSGKTNDKIKECNFTLKNSNEISVPYIEQCPINLEC
CCCCEEEEECCCCCEEHHHHHHCCCCCCCCCCEEECEEEECCCCEECCCCHHHCCCCEEE
KVINILPLGTHHLFLCEVLCTNINDELIDQKGKIHFEKANLISYSHGEYYALPQKSLGKF
EEEEEEECCCCHHHHHHHHHCCCCHHHHCCCCCEEEEECCEEEECCCCEEECCHHHHHHC
GFSVQKKKKKKKFNR
CCCHHHHHHHHCCCC
>Mature Secondary Structure
MEKTRFKGSAMLNPVPVALITTKNNEKTNVFTVGWIGTACTKPPIISIAIRPERLSFHYL
CCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEE
KDNPELVVNLPSNNLVKLVDYCGVRSGKTNDKIKECNFTLKNSNEISVPYIEQCPINLEC
CCCCEEEEECCCCCEEHHHHHHCCCCCCCCCCEEECEEEECCCCEECCCCHHHCCCCEEE
KVINILPLGTHHLFLCEVLCTNINDELIDQKGKIHFEKANLISYSHGEYYALPQKSLGKF
EEEEEEECCCCHHHHHHHHHCCCCHHHHCCCCCEEEEECCEEEECCCCEEECCHHHHHHC
GFSVQKKKKKKKFNR
CCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]