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The map label for this gene is 226950601

Identifier: 226950601

GI number: 226950601

Start: 3622214

End: 3622561

Strand: Direct

Name: 226950601

Synonym: CLM_3584

Alternate gene names: NA

Gene position: 3622214-3622561 (Clockwise)

Preceding gene: 226950600

Following gene: 226950605

Centisome position: 87.17

GC content: 23.56

Gene sequence:

>348_bases
ATGAGTTACTTTAATAAAGCTAACAGTTATTATAATACTAAAGATTATGAAAAAGCCATAAATCTATATAAAAAAGCGGC
AGAAATCAAAGAAAATGAAGCTTCATCTTTATACAACGCTTCTGTTTGCTTTATAAAATTAAAACAATATGAAAAAGCCA
TTCCTTTGTTAAAAAAGGCTCTAATATTAAAAAAAGATAGTAAATATTTTTTTAATTTAGGCTATTGCTATGCTATGTTA
AAAAATAATAAAAAGGCTCTGATGTACTTTAATACCGCTTGGGCTCTAAATCATAAAGATGAAGATTGTGAAAAAGCTAT
AAATATTATAGTTAAAAATTTAAAATAA

Upstream 100 bases:

>100_bases
TGAATAGATTTATTTTTTTTGCATAAAAATAACATAAATGGATATTATAATAATACAACTAAGCTTCAAGCGCATCTTAG
TAAACACAAGGAGGATACAT

Downstream 100 bases:

>100_bases
TATAATCCCCCTTAAATGTGAATATAAAATTAATTAATTTAATGATTTTTAACTATAATATAAAAATAAATATTAATCTA
TATAAAATGCTAGTAACTTT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Protein; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Repeats Containing Protein

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSYFNKANSYYNTKDYEKAINLYKKAAEIKENEASSLYNASVCFIKLKQYEKAIPLLKKALILKKDSKYFFNLGYCYAML
KNNKKALMYFNTAWALNHKDEDCEKAINIIVKNLK

Sequences:

>Translated_115_residues
MSYFNKANSYYNTKDYEKAINLYKKAAEIKENEASSLYNASVCFIKLKQYEKAIPLLKKALILKKDSKYFFNLGYCYAML
KNNKKALMYFNTAWALNHKDEDCEKAINIIVKNLK
>Mature_114_residues
SYFNKANSYYNTKDYEKAINLYKKAAEIKENEASSLYNASVCFIKLKQYEKAIPLLKKALILKKDSKYFFNLGYCYAMLK
NNKKALMYFNTAWALNHKDEDCEKAINIIVKNLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13507; Mature: 13376

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYFNKANSYYNTKDYEKAINLYKKAAEIKENEASSLYNASVCFIKLKQYEKAIPLLKKA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHH
LILKKDSKYFFNLGYCYAMLKNNKKALMYFNTAWALNHKDEDCEKAINIIVKNLK
HHHCCCCCEEEHHHHHHEEHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYFNKANSYYNTKDYEKAINLYKKAAEIKENEASSLYNASVCFIKLKQYEKAIPLLKKA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHH
LILKKDSKYFFNLGYCYAMLKNNKKALMYFNTAWALNHKDEDCEKAINIIVKNLK
HHHCCCCCEEEHHHHHHEEHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA