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The map label for this gene is ytlA [H]

Identifier: 226950597

GI number: 226950597

Start: 3614506

End: 3615534

Strand: Direct

Name: ytlA [H]

Synonym: CLM_3580

Alternate gene names: 226950597

Gene position: 3614506-3615534 (Clockwise)

Preceding gene: 226950591

Following gene: 226950599

Centisome position: 86.99

GC content: 28.09

Gene sequence:

>1029_bases
ATGAAAACAAAAAAGTCAACTTTACTTTCTTTAGTTACTATACTTATCTTTTCATTAACTTTATTTACTGGATGCAATAA
TAAAAAAGAAGAAACTGAAAAATTAACAAAAATAAAATTAAACGAAGTAGTTCGCTCTGTTTTTTATGCTCCTATGTATG
TAGCTATAAACGAAGGTATTTTTAAGGAAGAAGATATAGAAATAGACCTTTCAACTGGACAAGGTGCTGATAAAACTATG
CAGCAAGTCTTAAGTAAAAGTGCAGATATAGGTCTTTGTGGTCCAGAACAGATAATTTATATTTATAATCAAAAAAGAGA
AGATTACCCCATATTATTTGCTCAATTAACTCAATCTGATGGTTCCTTTTTAGTAGGAAAAAATAAAGAAGAAAATTTTA
GATGGGAATCTTTAAAAGGTAAAAAAATAATAGGTGGAAGACCTGGTGGCATGCCTGAAATGTCTTTAGAATATGTATTA
AAAAATCATGGTATTAATCCTAAATCAGATGTAGAACTTATTACAAATATAGCTTTTACAGCTACTGCTGGTGCTTTTAA
ATCAGGTACTTCCGATTATGTAGCTTTATTTGAACCTACTGCTAGTATGCTTGAAAAAGAAAATGCTGGGCATATAGTGG
CATCTATAGGTGAATCTGCTGGAAATATACCTTATACTTGTTATTTCAGTACTAAATCTTATATGGGAAAAAATCCAGAG
ACAATTCAAAAGTTCACAAATGCTATATACAAAGCACAAAAGTGGATAAATAAACATACTGAAGAAGAAATAGCAAAATC
TATAATTTCTTTCTTCCCTGGGGCCAAAGAAGACATACTTGTAAATGTTATAAAAAACTATAAAAAAATAAATTCCTTTG
CAAACACTCCTACTTTAAAAGAAGAGAATTTAAATAAATTAATGGATATAATCCAAAGTTATGATAAAGAATTAATTCCT
GAAAGACCTAATTTCAACAAAATAGTAAATACTAAATTTAGTAAAGAAGCTGAAAAAAACATTAAATAA

Upstream 100 bases:

>100_bases
TAAAAAGCTGCGCCAAATTGAAATCAAATAAAAATATTTAACATAATTATTAATATACTCATAAGATAAAATGATATAAA
ATTTATCTTGGAGGATTCTT

Downstream 100 bases:

>100_bases
TAATATAAAGAGTATCTAATAAATATTTTTCTATAATATATTATAGAAAAAAGAGGGCATCTTAAAATAAAAATAGCCTT
AATTTTAATATAGTAAATAT

Product: putative ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKTKKSTLLSLVTILIFSLTLFTGCNNKKEETEKLTKIKLNEVVRSVFYAPMYVAINEGIFKEEDIEIDLSTGQGADKTM
QQVLSKSADIGLCGPEQIIYIYNQKREDYPILFAQLTQSDGSFLVGKNKEENFRWESLKGKKIIGGRPGGMPEMSLEYVL
KNHGINPKSDVELITNIAFTATAGAFKSGTSDYVALFEPTASMLEKENAGHIVASIGESAGNIPYTCYFSTKSYMGKNPE
TIQKFTNAIYKAQKWINKHTEEEIAKSIISFFPGAKEDILVNVIKNYKKINSFANTPTLKEENLNKLMDIIQSYDKELIP
ERPNFNKIVNTKFSKEAEKNIK

Sequences:

>Translated_342_residues
MKTKKSTLLSLVTILIFSLTLFTGCNNKKEETEKLTKIKLNEVVRSVFYAPMYVAINEGIFKEEDIEIDLSTGQGADKTM
QQVLSKSADIGLCGPEQIIYIYNQKREDYPILFAQLTQSDGSFLVGKNKEENFRWESLKGKKIIGGRPGGMPEMSLEYVL
KNHGINPKSDVELITNIAFTATAGAFKSGTSDYVALFEPTASMLEKENAGHIVASIGESAGNIPYTCYFSTKSYMGKNPE
TIQKFTNAIYKAQKWINKHTEEEIAKSIISFFPGAKEDILVNVIKNYKKINSFANTPTLKEENLNKLMDIIQSYDKELIP
ERPNFNKIVNTKFSKEAEKNIK
>Mature_342_residues
MKTKKSTLLSLVTILIFSLTLFTGCNNKKEETEKLTKIKLNEVVRSVFYAPMYVAINEGIFKEEDIEIDLSTGQGADKTM
QQVLSKSADIGLCGPEQIIYIYNQKREDYPILFAQLTQSDGSFLVGKNKEENFRWESLKGKKIIGGRPGGMPEMSLEYVL
KNHGINPKSDVELITNIAFTATAGAFKSGTSDYVALFEPTASMLEKENAGHIVASIGESAGNIPYTCYFSTKSYMGKNPE
TIQKFTNAIYKAQKWINKHTEEEIAKSIISFFPGAKEDILVNVIKNYKKINSFANTPTLKEENLNKLMDIIQSYDKELIP
ERPNFNKIVNTKFSKEAEKNIK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 38457; Mature: 38457

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKKSTLLSLVTILIFSLTLFTGCNNKKEETEKLTKIKLNEVVRSVFYAPMYVAINEGI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
FKEEDIEIDLSTGQGADKTMQQVLSKSADIGLCGPEQIIYIYNQKREDYPILFAQLTQSD
CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCC
GSFLVGKNKEENFRWESLKGKKIIGGRPGGMPEMSLEYVLKNHGINPKSDVELITNIAFT
CCEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ATAGAFKSGTSDYVALFEPTASMLEKENAGHIVASIGESAGNIPYTCYFSTKSYMGKNPE
HCCCHHCCCCCCEEEEECCHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCHHHCCCCHH
TIQKFTNAIYKAQKWINKHTEEEIAKSIISFFPGAKEDILVNVIKNYKKINSFANTPTLK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
EENLNKLMDIIQSYDKELIPERPNFNKIVNTKFSKEAEKNIK
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MKTKKSTLLSLVTILIFSLTLFTGCNNKKEETEKLTKIKLNEVVRSVFYAPMYVAINEGI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
FKEEDIEIDLSTGQGADKTMQQVLSKSADIGLCGPEQIIYIYNQKREDYPILFAQLTQSD
CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCC
GSFLVGKNKEENFRWESLKGKKIIGGRPGGMPEMSLEYVLKNHGINPKSDVELITNIAFT
CCEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ATAGAFKSGTSDYVALFEPTASMLEKENAGHIVASIGESAGNIPYTCYFSTKSYMGKNPE
HCCCHHCCCCCCEEEEECCHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCHHHCCCCHH
TIQKFTNAIYKAQKWINKHTEEEIAKSIISFFPGAKEDILVNVIKNYKKINSFANTPTLK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
EENLNKLMDIIQSYDKELIPERPNFNKIVNTKFSKEAEKNIK
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]