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The map label for this gene is spoIIAA [H]

Identifier: 226950518

GI number: 226950518

Start: 3513868

End: 3514203

Strand: Reverse

Name: spoIIAA [H]

Synonym: CLM_3494

Alternate gene names: 226950518

Gene position: 3514203-3513868 (Counterclockwise)

Preceding gene: 226950520

Following gene: 226950517

Centisome position: 84.57

GC content: 28.27

Gene sequence:

>336_bases
ATGTATTTAAAATTTGATAAAAAAGCAGACAAACTTATAGTAACTATGGCAGGGGAATTAGATCATCATAGTGCAGAAGA
AGTTAGAAATGTAATTGACGATAGGTTAGATAGAGGAAATTTAAATAAATTAATATTAGATTTTAGTAAAGTTAACTTTA
TGGATAGTTCAGGTATAGGAGTAGTTATAGGAAGATATAAAAAATTATCATTAAGGGATGGAAAGGTATGCCTAACTAAT
GTACAAGAAGCAGTAAGAAGAGTATTTGAACTTTCAGGTATGTTTAAAATAGTAAATCTTTATGACAGTGTGGATGAAGC
CGTAGAAAACTTATAA

Upstream 100 bases:

>100_bases
TAATAAAAAGAGATATAAAAGAAAAAGAAGGAAAATTATTCCATATGTAGAATAGTAATATTGATGATTTATAAAAAAAC
ATAAAATTGGGGGGGATAGT

Downstream 100 bases:

>100_bases
TGGGGGGATTTATAAGATGTATGAAAACAAAATGAAAATAGAATTTTTAAGTAAGTCAGAAAATGAAAGTTTTGCTAGAG
TATCAGTAGCGGCTTTTATA

Product: anti-sigma F factor antagonist

Products: NA

Alternate protein names: Stage II sporulation protein AA [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MYLKFDKKADKLIVTMAGELDHHSAEEVRNVIDDRLDRGNLNKLILDFSKVNFMDSSGIGVVIGRYKKLSLRDGKVCLTN
VQEAVRRVFELSGMFKIVNLYDSVDEAVENL

Sequences:

>Translated_111_residues
MYLKFDKKADKLIVTMAGELDHHSAEEVRNVIDDRLDRGNLNKLILDFSKVNFMDSSGIGVVIGRYKKLSLRDGKVCLTN
VQEAVRRVFELSGMFKIVNLYDSVDEAVENL
>Mature_111_residues
MYLKFDKKADKLIVTMAGELDHHSAEEVRNVIDDRLDRGNLNKLILDFSKVNFMDSSGIGVVIGRYKKLSLRDGKVCLTN
VQEAVRRVFELSGMFKIVNLYDSVDEAVENL

Specific function: In the phosphorylated form it could act as an anti-anti- sigma factor that counteracts spoIIAB and thus releases sigma f from inhibition [H]

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR014237
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 12623; Mature: 12623

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLKFDKKADKLIVTMAGELDHHSAEEVRNVIDDRLDRGNLNKLILDFSKVNFMDSSGIG
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCEECCCCCE
VVIGRYKKLSLRDGKVCLTNVQEAVRRVFELSGMFKIVNLYDSVDEAVENL
EEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYLKFDKKADKLIVTMAGELDHHSAEEVRNVIDDRLDRGNLNKLILDFSKVNFMDSSGIG
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCEECCCCCE
VVIGRYKKLSLRDGKVCLTNVQEAVRRVFELSGMFKIVNLYDSVDEAVENL
EEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8921882 [H]