Click here to switch to the map view.

The map label for this gene is 226950481

Identifier: 226950481

GI number: 226950481

Start: 3478550

End: 3478678

Strand: Reverse

Name: 226950481

Synonym: CLM_3457

Alternate gene names: NA

Gene position: 3478678-3478550 (Counterclockwise)

Preceding gene: 226950483

Following gene: 226950480

Centisome position: 83.72

GC content: 27.91

Gene sequence:

>129_bases
ATGTCTAAGAAATATAATAGAACACAACATGATAAAAAGGAAGACGGAAATTTTAAAAAGAAAAATATAAAACATGATCC
TCAAGCAGAAAGTGCAAGGGCAGTATTTGGATTGAAAGAGAATAAATAA

Upstream 100 bases:

>100_bases
ATAAATATGTAAAATAAGGTTAGATATTTTAAATTAATTTAAATTTATATAAATAAAAAATATTATAGGTGAAATATTAT
AATTAGAAAGGAGTGTTTTT

Downstream 100 bases:

>100_bases
TTTAATTATATCTGAATAAAATTTTAAAAAATTATGATTTTCGTAATGTATTACATTAAAATTATAAATAAATTATATAC
TAATAATATAAAAGTAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 41

Protein sequence:

>42_residues
MSKKYNRTQHDKKEDGNFKKKNIKHDPQAESARAVFGLKENK

Sequences:

>Translated_42_residues
MSKKYNRTQHDKKEDGNFKKKNIKHDPQAESARAVFGLKENK
>Mature_41_residues
SKKYNRTQHDKKEDGNFKKKNIKHDPQAESARAVFGLKENK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4946; Mature: 4814

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKYNRTQHDKKEDGNFKKKNIKHDPQAESARAVFGLKENK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
SKKYNRTQHDKKEDGNFKKKNIKHDPQAESARAVFGLKENK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA