Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is 226950468
Identifier: 226950468
GI number: 226950468
Start: 3469308
End: 3469628
Strand: Reverse
Name: 226950468
Synonym: CLM_3443
Alternate gene names: NA
Gene position: 3469628-3469308 (Counterclockwise)
Preceding gene: 226950469
Following gene: 226950467
Centisome position: 83.5
GC content: 24.3
Gene sequence:
>321_bases ATGTCAACTATATTAGTTAAAGAAATAGAAAATAAAGTTTTTGAAGAGATAGGGTCATTTAGAGAAGAAAATGCAGTATT AAAGATTTTATTAAAAGAGTATGTAAAGAAAAGCATAGATTATGAGAAATTATTAAAGGAAAGTATAAATTTATTAGACA AACATCAAGAGGCATTAGAATTTTTAAGAGTCGCGAAAAATAGCTGGACGGATGAAGTGGTTAAGCATTACTTTACAATA AAAGATTTACAAAAAGCTTTAGATATTGTGGGAAAAGAAATAATGATATATGAGTTAAATAAAAATAATAAAGAAATGTA A
Upstream 100 bases:
>100_bases AAGCTAAAGAGAAAACAGAGATATTAAAAGAATTATTGAAATAAGAATATTGATTGTCTTGAATAATATAATAGAAAATT AAGTATGATGGAGGTATAAG
Downstream 100 bases:
>100_bases AAAAGTATATAAAATTTAAACCAAAAGGCATTTCTAAAGGCCTTTAAAGATATCAAAAAGTAGCATTATAGTTATGGAAA ATATAATAAAGAATTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSTILVKEIENKVFEEIGSFREENAVLKILLKEYVKKSIDYEKLLKESINLLDKHQEALEFLRVAKNSWTDEVVKHYFTI KDLQKALDIVGKEIMIYELNKNNKEM
Sequences:
>Translated_106_residues MSTILVKEIENKVFEEIGSFREENAVLKILLKEYVKKSIDYEKLLKESINLLDKHQEALEFLRVAKNSWTDEVVKHYFTI KDLQKALDIVGKEIMIYELNKNNKEM >Mature_105_residues STILVKEIENKVFEEIGSFREENAVLKILLKEYVKKSIDYEKLLKESINLLDKHQEALEFLRVAKNSWTDEVVKHYFTIK DLQKALDIVGKEIMIYELNKNNKEM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12577; Mature: 12446
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTILVKEIENKVFEEIGSFREENAVLKILLKEYVKKSIDYEKLLKESINLLDKHQEALE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FLRVAKNSWTDEVVKHYFTIKDLQKALDIVGKEIMIYELNKNNKEM HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCC >Mature Secondary Structure STILVKEIENKVFEEIGSFREENAVLKILLKEYVKKSIDYEKLLKESINLLDKHQEALE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FLRVAKNSWTDEVVKHYFTIKDLQKALDIVGKEIMIYELNKNNKEM HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA