Click here to switch to the map view.

The map label for this gene is 226950461

Identifier: 226950461

GI number: 226950461

Start: 3465258

End: 3465674

Strand: Reverse

Name: 226950461

Synonym: CLM_3436

Alternate gene names: NA

Gene position: 3465674-3465258 (Counterclockwise)

Preceding gene: 226950462

Following gene: 226950460

Centisome position: 83.4

GC content: 32.37

Gene sequence:

>417_bases
ATGGATTTAAAAGTAACTAATATAGAAGATTTAAAAAAAGTAGCTCAAGGTGAAGTGATTCAGTTACCACAATTTGGGCA
AGGGATACCTTTTAATGCTAGAGTTAAAAGAGTATCTCTTTTAAATTTGGTAAGAAAAGGAGTTGTACCTAACAAGCTAT
TGAGTGCAGCAGAGGAACTATTTTATGGTAAACAGAGTTCGAAAGAGAATGTTGACTTAACACAAATGACAGATGTTATG
TATATTATGGCTGAGAATGCACTTGTAGAACCTTCTATAGAAGATTTAAAAAGTGTAGAATTAGAGCTTACAGATGAACA
AATAGTAGCATTGTTTAATTATACACAGGAAGGGGTTAGTGAATTAGACTCCTTTCGTGAAGAGTCAGAGAATACTGAGT
GTAATATCAATAAGTAA

Upstream 100 bases:

>100_bases
CTGAAGCTAAAGAAATAAATAAATTAGATGGAAGTGGTAAAACCACAGCATTATCCACAGAATTTAAAACAATAAAAATT
AGATAGTGAGGGTATAACAA

Downstream 100 bases:

>100_bases
ACAATATAGACAAAGGCCTAGTGAAATTATAGGATTGACTAATGATTATGAAGCTTTTTGCTTTGATGAGGCATGTGTCT
ATATATTAAATGAGATTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MDLKVTNIEDLKKVAQGEVIQLPQFGQGIPFNARVKRVSLLNLVRKGVVPNKLLSAAEELFYGKQSSKENVDLTQMTDVM
YIMAENALVEPSIEDLKSVELELTDEQIVALFNYTQEGVSELDSFREESENTECNINK

Sequences:

>Translated_138_residues
MDLKVTNIEDLKKVAQGEVIQLPQFGQGIPFNARVKRVSLLNLVRKGVVPNKLLSAAEELFYGKQSSKENVDLTQMTDVM
YIMAENALVEPSIEDLKSVELELTDEQIVALFNYTQEGVSELDSFREESENTECNINK
>Mature_138_residues
MDLKVTNIEDLKKVAQGEVIQLPQFGQGIPFNARVKRVSLLNLVRKGVVPNKLLSAAEELFYGKQSSKENVDLTQMTDVM
YIMAENALVEPSIEDLKSVELELTDEQIVALFNYTQEGVSELDSFREESENTECNINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15554; Mature: 15554

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKVTNIEDLKKVAQGEVIQLPQFGQGIPFNARVKRVSLLNLVRKGVVPNKLLSAAEEL
CCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FYGKQSSKENVDLTQMTDVMYIMAENALVEPSIEDLKSVELELTDEQIVALFNYTQEGVS
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHHHHH
ELDSFREESENTECNINK
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDLKVTNIEDLKKVAQGEVIQLPQFGQGIPFNARVKRVSLLNLVRKGVVPNKLLSAAEEL
CCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FYGKQSSKENVDLTQMTDVMYIMAENALVEPSIEDLKSVELELTDEQIVALFNYTQEGVS
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHHHHH
ELDSFREESENTECNINK
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA