| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226950457
Identifier: 226950457
GI number: 226950457
Start: 3461811
End: 3462896
Strand: Reverse
Name: 226950457
Synonym: CLM_3432
Alternate gene names: NA
Gene position: 3462896-3461811 (Counterclockwise)
Preceding gene: 226950458
Following gene: 226950456
Centisome position: 83.34
GC content: 28.36
Gene sequence:
>1086_bases ATGACAAAGTGTAAAGTAGAATTTTATAAAAAAAATGGCTATCAGGCTTTTGAAAATGGTGATGCTAATAAAATAACATT AGAACATTGTTTAGTGTCAGTAAAAATAAATAGAAATTTAACTACGCCTACTGCTGAAGCTACGATTACAGCACAATATG AAAATCTACCTACTGCTATTTTTGCAGGAGGAACACAAGGGATAATAGATAATTTTGCACAGGTAAAAATTTATATAGAG GATGTACTTCAATTTACAGGTGTAATTAAAAAATATGATTATAATACACTTGATAAAACAATAGAAATGACTTGCCATGA TATGTATTATAGAATGTTAAATTTATGTGATAAGGAATTAAAATTTTATAATAAAACCGCAGCAGATATAATTTCTACTG TTGTATCCGATGCTAAATGTAGTTTTCAAAGAAGTGGAGGAAATAATTATACTGTGCCTAAATTAGAATGTGAAATAGGT ACTATGTATAATGATATAATTAGTAATTTGGTAGAAACTATGTATGCTAGAATAAGGGCAAACAAAAACGGTGCAATAAT ACTAGAAGAACAATATCCTGCTTATAATGAATCAAATCATGAAGCAAATCACCATGATTATGTTTTATCTGTTGATACTA ATTTATCTAGTGAAACTGCTAGCAGAGATTCTAGTTTAATGAGAAATATATTAAAGATTTGTTGTAATGATAAATATTCT ATTTTTGAATCCAAAGCTATGACTAGTTATTTAAATGGTGAAAGATGGGTAGATATAATTGATAATCCATTAGCTAGTAC TTCATTATTAAAACAAAAGGTAGCAGGATATAAATTTTTAGATATGTGGAGGGAGAGTACTGCTCTAAATGTAGTACCAG TAGCTGGAATACCTAATATTGATTTAGGACAAGTAGTTAAATTAGTAAATAATCAAAGAGGTAATGGTTGGTATTTAATT GTAGGAATAAGTACAGAAATAAATGCTGACACATATGTAGATACATTGCAATTACAAGGTATGCGAGATAAAACAAAAGT GTATGATCAATGTATCCAAATAGGCAGTGGAAGATTGAAACAATAG
Upstream 100 bases:
>100_bases CAAAATAAGTTTGAGATAGATACTCCTATCGAAGGTGATATATATTATATAAATTTAGAGCTTTTATGTAATCATGAAGC TAGTGGATGGGTGAAAGATA
Downstream 100 bases:
>100_bases TAGGTGATTAAAATGGCACATATGGGATATAAAAATTTTAGGGAACCAGTAGTCTATATTTTAGATCAAGAACTAAGAAA AAGAAATTTCAAAAATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRNLTTPTAEATITAQYENLPTAIFAGGTQGIIDNFAQVKIYIE DVLQFTGVIKKYDYNTLDKTIEMTCHDMYYRMLNLCDKELKFYNKTAADIISTVVSDAKCSFQRSGGNNYTVPKLECEIG TMYNDIISNLVETMYARIRANKNGAIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYS IFESKAMTSYLNGERWVDIIDNPLASTSLLKQKVAGYKFLDMWRESTALNVVPVAGIPNIDLGQVVKLVNNQRGNGWYLI VGISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLKQ
Sequences:
>Translated_361_residues MTKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRNLTTPTAEATITAQYENLPTAIFAGGTQGIIDNFAQVKIYIE DVLQFTGVIKKYDYNTLDKTIEMTCHDMYYRMLNLCDKELKFYNKTAADIISTVVSDAKCSFQRSGGNNYTVPKLECEIG TMYNDIISNLVETMYARIRANKNGAIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYS IFESKAMTSYLNGERWVDIIDNPLASTSLLKQKVAGYKFLDMWRESTALNVVPVAGIPNIDLGQVVKLVNNQRGNGWYLI VGISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLKQ >Mature_360_residues TKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRNLTTPTAEATITAQYENLPTAIFAGGTQGIIDNFAQVKIYIED VLQFTGVIKKYDYNTLDKTIEMTCHDMYYRMLNLCDKELKFYNKTAADIISTVVSDAKCSFQRSGGNNYTVPKLECEIGT MYNDIISNLVETMYARIRANKNGAIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYSI FESKAMTSYLNGERWVDIIDNPLASTSLLKQKVAGYKFLDMWRESTALNVVPVAGIPNIDLGQVVKLVNNQRGNGWYLIV GISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40778; Mature: 40647
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRNLTTPTAEATITAQYENLPTAI CCCEEEEEEECCCCEECCCCCCCEEEHHHEEEEEEECCCCCCCCCCEEEEEECCCCCEEE FAGGTQGIIDNFAQVKIYIEDVLQFTGVIKKYDYNTLDKTIEMTCHDMYYRMLNLCDKEL EECCCHHHHCCHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KFYNKTAADIISTVVSDAKCSFQRSGGNNYTVPKLECEIGTMYNDIISNLVETMYARIRA HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC NKNGAIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYS CCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH IFESKAMTSYLNGERWVDIIDNPLASTSLLKQKVAGYKFLDMWRESTALNVVPVAGIPNI HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCC DLGQVVKLVNNQRGNGWYLIVGISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLK CHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHEEHHEECCCCHHHHHHHHHHHHCCCCCC Q C >Mature Secondary Structure TKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRNLTTPTAEATITAQYENLPTAI CCEEEEEEECCCCEECCCCCCCEEEHHHEEEEEEECCCCCCCCCCEEEEEECCCCCEEE FAGGTQGIIDNFAQVKIYIEDVLQFTGVIKKYDYNTLDKTIEMTCHDMYYRMLNLCDKEL EECCCHHHHCCHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KFYNKTAADIISTVVSDAKCSFQRSGGNNYTVPKLECEIGTMYNDIISNLVETMYARIRA HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC NKNGAIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYS CCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH IFESKAMTSYLNGERWVDIIDNPLASTSLLKQKVAGYKFLDMWRESTALNVVPVAGIPNI HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCC DLGQVVKLVNNQRGNGWYLIVGISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLK CHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHEEHHEECCCCHHHHHHHHHHHHCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA