Click here to switch to the map view.

The map label for this gene is 226950454

Identifier: 226950454

GI number: 226950454

Start: 3459114

End: 3460091

Strand: Reverse

Name: 226950454

Synonym: CLM_3429

Alternate gene names: NA

Gene position: 3460091-3459114 (Counterclockwise)

Preceding gene: 226950455

Following gene: 226950453

Centisome position: 83.27

GC content: 24.13

Gene sequence:

>978_bases
TTGAGCTTACCTAAATATATAATTAATTTTGAAGAACTTACAGAAGATTTAAAAAATCATTTATTAAGTCTGATAGATGA
TAACATAAGAATTAATTATCCAGAGATAAATACTAATAATATACAAAACTTACTACAACAGTTAAAAGATTTATTGCCAA
GTGTACAATATGAAGGTCTAAAGAAAAAAATTGATACTTTTATATACAGAAAAATTGAAGGTATTCAAAAGGTAAAAGGT
ATATTATTAGATATCCCAGCAATACAAAATGATTATAAAGAGCAAATTAAATTTGATAAAGATATATATATTACAGGATT
GCATTTTAATCAGACAGGTTGGAAAAAGGATGATAGATACAGTTTAGAAGTTAATAAAATCAAAATAATAGATAATGCAA
CAACCAAGGAAATAGGAGAGCATAAATACTTTAATACATTTTATAAAGTAAATGCTAATACTCTTATTTCTTTTATTTTT
CATAATTTAAGCGGCAATAGTAGACAAACAATGATAGATCTAGAGTATATAGATGGAGAGGATTCTAATATTCCAATAGA
ACCACCAGGAATAGAGGATATAGATAATGAATGGGATATAGCAGTAGTAATGAATTGGGAAGAGAATACAGATGCAGATA
TAGATTTACATGGCGAGATAGATGGTAAAAAAGTTTGGTATGGTAATAAATCCTATGATGGATTTTATCTTAATTTTGAT
TATACAAGTCATAAAACAAACAAAAATCCTGAAATAATAAGTGTTAAAGGGTACAAAAATAAAAAGCTTCTTATAAGTAT
AAAGAATTTTAATGGAGTAGAACTAAAAGAACCTGTAACTTTGGAAATATATCAATATAGACCTTATGGTAATAAACTAC
TTAAAAAATTTAATGTGAATTTAGATACAAATAGAGATTTAAAAGATATATTTATAATGGACTTAAATACTTTAAAAATA
ACAAATTTAAATAAATAA

Upstream 100 bases:

>100_bases
TTTAATATTAAGAATCCTTATTTAAAGATAACACAAACAGCTCAAGTTTATCCAAGAAATGATACAAGTTCAATCTTTGA
ATATAAAGAAGGTGCTTAAT

Downstream 100 bases:

>100_bases
TTGATAACAGGAGGTAGATAAAATGGCTACAGATAATTTTTATTTTGTTGAAGGAAATACAAGTGTAAAAAACTTAGTAA
AAACCTTAGCAACTGAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSLPKYIINFEELTEDLKNHLLSLIDDNIRINYPEINTNNIQNLLQQLKDLLPSVQYEGLKKKIDTFIYRKIEGIQKVKG
ILLDIPAIQNDYKEQIKFDKDIYITGLHFNQTGWKKDDRYSLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTLISFIF
HNLSGNSRQTMIDLEYIDGEDSNIPIEPPGIEDIDNEWDIAVVMNWEENTDADIDLHGEIDGKKVWYGNKSYDGFYLNFD
YTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNVNLDTNRDLKDIFIMDLNTLKI
TNLNK

Sequences:

>Translated_325_residues
MSLPKYIINFEELTEDLKNHLLSLIDDNIRINYPEINTNNIQNLLQQLKDLLPSVQYEGLKKKIDTFIYRKIEGIQKVKG
ILLDIPAIQNDYKEQIKFDKDIYITGLHFNQTGWKKDDRYSLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTLISFIF
HNLSGNSRQTMIDLEYIDGEDSNIPIEPPGIEDIDNEWDIAVVMNWEENTDADIDLHGEIDGKKVWYGNKSYDGFYLNFD
YTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNVNLDTNRDLKDIFIMDLNTLKI
TNLNK
>Mature_324_residues
SLPKYIINFEELTEDLKNHLLSLIDDNIRINYPEINTNNIQNLLQQLKDLLPSVQYEGLKKKIDTFIYRKIEGIQKVKGI
LLDIPAIQNDYKEQIKFDKDIYITGLHFNQTGWKKDDRYSLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTLISFIFH
NLSGNSRQTMIDLEYIDGEDSNIPIEPPGIEDIDNEWDIAVVMNWEENTDADIDLHGEIDGKKVWYGNKSYDGFYLNFDY
TSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNVNLDTNRDLKDIFIMDLNTLKIT
NLNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38092; Mature: 37961

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPKYIINFEELTEDLKNHLLSLIDDNIRINYPEINTNNIQNLLQQLKDLLPSVQYEGL
CCCCHHEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHH
KKKIDTFIYRKIEGIQKVKGILLDIPAIQNDYKEQIKFDKDIYITGLHFNQTGWKKDDRY
HHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEE
SLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTLISFIFHNLSGNSRQTMIDLEYIDGE
EEEEEEEEEEECCCHHHHCCCCEEEEEEEECHHHHHHHHHHHCCCCCCEEEEEEEEECCC
DSNIPIEPPGIEDIDNEWDIAVVMNWEENTDADIDLHGEIDGKKVWYGNKSYDGFYLNFD
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEEE
YTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNVN
ECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEECCCEEEEEEEECCCHHHHHHHHCCC
LDTNRDLKDIFIMDLNTLKITNLNK
CCCCCCCCEEEEEECCEEEEEECCC
>Mature Secondary Structure 
SLPKYIINFEELTEDLKNHLLSLIDDNIRINYPEINTNNIQNLLQQLKDLLPSVQYEGL
CCCHHEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHH
KKKIDTFIYRKIEGIQKVKGILLDIPAIQNDYKEQIKFDKDIYITGLHFNQTGWKKDDRY
HHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEE
SLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTLISFIFHNLSGNSRQTMIDLEYIDGE
EEEEEEEEEEECCCHHHHCCCCEEEEEEEECHHHHHHHHHHHCCCCCCEEEEEEEEECCC
DSNIPIEPPGIEDIDNEWDIAVVMNWEENTDADIDLHGEIDGKKVWYGNKSYDGFYLNFD
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEEE
YTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNVN
ECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEECCCEEEEEEEECCCHHHHHHHHCCC
LDTNRDLKDIFIMDLNTLKITNLNK
CCCCCCCCEEEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA