Click here to switch to the map view.

The map label for this gene is 226950452

Identifier: 226950452

GI number: 226950452

Start: 3455946

End: 3457841

Strand: Reverse

Name: 226950452

Synonym: CLM_3427

Alternate gene names: NA

Gene position: 3457841-3455946 (Counterclockwise)

Preceding gene: 226950453

Following gene: 226950451

Centisome position: 83.22

GC content: 21.84

Gene sequence:

>1896_bases
ATGCCCCTACATAAAATACCCCTATGTAGTTTTGAATATGTAGGGGACAATGCTTTTTCTAGTGGAACTTTTATATACGA
TACTACAGAAAAAGTATTAAAGACTACAGAAAAATTATTTTATAAAGAAACAACCATTGAAATAGATAAGGTTAAGGAAA
ATAAATTATTTTATAAACAGCTTAAAGATAATATAGGTAAAGAAAAGAATAAATATTTATTTAAAGAAGTTGCTGATATA
AAAAAACAATTTGAAAAAGAGTTAAAATTAAGAAATAAAGAAATAAATAAAAACAATACTATATCTTTAGATAAAATAAA
ATATATAAGTATAAATAGAATAACAAGTAAGGAACTTGATGTAAGAAAAAATACAGATATATCTATATGTTATAACAATA
AGTTATTGGGAAGAGAAATTCTACAACTAAATAAAGCTAATAATTTAATAAATTTATCTATAGATAGAGAAAATTTACAA
TTAAATAAATCTAAAGATATATATACAGATTCAATAGTAGAAAAAGAAATATTTAAAGATGAATCCTTACAAAAATTAAA
ACTAGGAAAATATATAAATATAGAAAAAGGTGTTGGATACTATTTTAATAGGAGTTATTGCAAGGAAATAGACATAGATA
AATTTAAGTTTGTTAAGAAACATGGAAATAAAAATATAAATAAAAATAAATATAGATTTATAGATAGATCCAATCTAAAA
GAAGTAGCTAAAATAAGTAATAAAACAATGTTAAACAAAGATATTATAATTGGAATAGATATAGATACAAGTATAAATAA
TTTAAAAATATTAGATTTAAAAGATATAGATAGAAATTATAAAACCATGCTAATGTATAATATAGCTCTAAAGTATATGG
AAAAATATAGAATTAAAAATGCATTAAATAAAATAGCACATAAAGAAATATGCAAAGACCATAATAAAAAATATTTTTAT
AAAGATGTATTTAAATTTATAGATAAAAGTGTCAACGGGTATTTAGATAGGCAAGCTATAAGATCTATATTTAAATATAA
TAATAGATATTTAGATAGGGAATATACAACTAATATATTTAAACATAATGAAAAATATTTTGGTAACAACCCTATAATTA
ATATTTATAAGCAGATAGAAAGAGATTTATTAAATTTAAGTATATGGCAAATTTATAGACAAAGTAATAAATATTTAAAT
AATGAAGCTATAAAACAAATATATGTACCCAATAAAAATAAATTTATTGAAATAACCAAAAGATGGTGGTGGTTAAAACC
TACAAATGCAACGGATAGGCTAATTGTTCCTAATAAAGATTATATATATAATAATGATCTATTAAATAATTTAGATTATG
AATATCTAAGATTTAATAATCATCCTATTGAATGGGGTAAAGATTGGGGAGTGGATTATAAGATTCCACCTATGACAATT
AGTATTGAAATAATGTTAGATTTAACAAATATTTTAATAATGATATGGCATAAAAATACACAATCTTGGTTAAGTTGTAC
AGGTAAAGAATCTATCCAATTTATAATGGAATTGATTTATGATTGGTATACTTTAGATACATCAAGCCCCAATATAGATT
ATATTAGAGCATACAGATGGATTAAGTGGGAGGCTGAAAAGGTATATTTCCTTGATGCTAAAAATGGGTTACAAGCTATA
GGATTACTTATAGCTAATTTAATAGATTATCTAAAACAACATCATTTTAATTTAGTACCAATTTGGCATAATCCGAAAGC
TATGGATATTGAAAGAAAATTTAATAAAATAGCAACTAATGGTGATATTATAAAAGATTTAGATAAACTAAAGGGTAAAA
GAAATTACATGATAGAAACACAAAACTTTGAAAAGAAAAATATATTTGGGAGGTAG

Upstream 100 bases:

>100_bases
AAATTACAGCGCCATATTGTTTCTTAAATAATAGTGCTAATATAAATTATTGTGTTGCTATTAGATGTTATAAAACAACT
AAATAAGAGAGGTGGTATAA

Downstream 100 bases:

>100_bases
ATAGCATGTTAACAAGTACAATAGATTTTAAAAAAACTAGACAAAAGATGTGGGGAATATTAAAAAATAAAACCTTAGCC
CAATTACCATACGGCCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MPLHKIPLCSFEYVGDNAFSSGTFIYDTTEKVLKTTEKLFYKETTIEIDKVKENKLFYKQLKDNIGKEKNKYLFKEVADI
KKQFEKELKLRNKEINKNNTISLDKIKYISINRITSKELDVRKNTDISICYNNKLLGREILQLNKANNLINLSIDRENLQ
LNKSKDIYTDSIVEKEIFKDESLQKLKLGKYINIEKGVGYYFNRSYCKEIDIDKFKFVKKHGNKNINKNKYRFIDRSNLK
EVAKISNKTMLNKDIIIGIDIDTSINNLKILDLKDIDRNYKTMLMYNIALKYMEKYRIKNALNKIAHKEICKDHNKKYFY
KDVFKFIDKSVNGYLDRQAIRSIFKYNNRYLDREYTTNIFKHNEKYFGNNPIINIYKQIERDLLNLSIWQIYRQSNKYLN
NEAIKQIYVPNKNKFIEITKRWWWLKPTNATDRLIVPNKDYIYNNDLLNNLDYEYLRFNNHPIEWGKDWGVDYKIPPMTI
SIEIMLDLTNILIMIWHKNTQSWLSCTGKESIQFIMELIYDWYTLDTSSPNIDYIRAYRWIKWEAEKVYFLDAKNGLQAI
GLLIANLIDYLKQHHFNLVPIWHNPKAMDIERKFNKIATNGDIIKDLDKLKGKRNYMIETQNFEKKNIFGR

Sequences:

>Translated_631_residues
MPLHKIPLCSFEYVGDNAFSSGTFIYDTTEKVLKTTEKLFYKETTIEIDKVKENKLFYKQLKDNIGKEKNKYLFKEVADI
KKQFEKELKLRNKEINKNNTISLDKIKYISINRITSKELDVRKNTDISICYNNKLLGREILQLNKANNLINLSIDRENLQ
LNKSKDIYTDSIVEKEIFKDESLQKLKLGKYINIEKGVGYYFNRSYCKEIDIDKFKFVKKHGNKNINKNKYRFIDRSNLK
EVAKISNKTMLNKDIIIGIDIDTSINNLKILDLKDIDRNYKTMLMYNIALKYMEKYRIKNALNKIAHKEICKDHNKKYFY
KDVFKFIDKSVNGYLDRQAIRSIFKYNNRYLDREYTTNIFKHNEKYFGNNPIINIYKQIERDLLNLSIWQIYRQSNKYLN
NEAIKQIYVPNKNKFIEITKRWWWLKPTNATDRLIVPNKDYIYNNDLLNNLDYEYLRFNNHPIEWGKDWGVDYKIPPMTI
SIEIMLDLTNILIMIWHKNTQSWLSCTGKESIQFIMELIYDWYTLDTSSPNIDYIRAYRWIKWEAEKVYFLDAKNGLQAI
GLLIANLIDYLKQHHFNLVPIWHNPKAMDIERKFNKIATNGDIIKDLDKLKGKRNYMIETQNFEKKNIFGR
>Mature_630_residues
PLHKIPLCSFEYVGDNAFSSGTFIYDTTEKVLKTTEKLFYKETTIEIDKVKENKLFYKQLKDNIGKEKNKYLFKEVADIK
KQFEKELKLRNKEINKNNTISLDKIKYISINRITSKELDVRKNTDISICYNNKLLGREILQLNKANNLINLSIDRENLQL
NKSKDIYTDSIVEKEIFKDESLQKLKLGKYINIEKGVGYYFNRSYCKEIDIDKFKFVKKHGNKNINKNKYRFIDRSNLKE
VAKISNKTMLNKDIIIGIDIDTSINNLKILDLKDIDRNYKTMLMYNIALKYMEKYRIKNALNKIAHKEICKDHNKKYFYK
DVFKFIDKSVNGYLDRQAIRSIFKYNNRYLDREYTTNIFKHNEKYFGNNPIINIYKQIERDLLNLSIWQIYRQSNKYLNN
EAIKQIYVPNKNKFIEITKRWWWLKPTNATDRLIVPNKDYIYNNDLLNNLDYEYLRFNNHPIEWGKDWGVDYKIPPMTIS
IEIMLDLTNILIMIWHKNTQSWLSCTGKESIQFIMELIYDWYTLDTSSPNIDYIRAYRWIKWEAEKVYFLDAKNGLQAIG
LLIANLIDYLKQHHFNLVPIWHNPKAMDIERKFNKIATNGDIIKDLDKLKGKRNYMIETQNFEKKNIFGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75713; Mature: 75581

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHKIPLCSFEYVGDNAFSSGTFIYDTTEKVLKTTEKLFYKETTIEIDKVKENKLFYKQ
CCCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHH
LKDNIGKEKNKYLFKEVADIKKQFEKELKLRNKEINKNNTISLDKIKYISINRITSKELD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECEEEEEEEECCCCCCCC
VRKNTDISICYNNKLLGREILQLNKANNLINLSIDRENLQLNKSKDIYTDSIVEKEIFKD
CCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHHCC
ESLQKLKLGKYINIEKGVGYYFNRSYCKEIDIDKFKFVKKHGNKNINKNKYRFIDRSNLK
CCHHHHHCCCEEEEECCCCCEECCHHHCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCHH
EVAKISNKTMLNKDIIIGIDIDTSINNLKILDLKDIDRNYKTMLMYNIALKYMEKYRIKN
HHHHHHCCEEECCCEEEEEEECCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ALNKIAHKEICKDHNKKYFYKDVFKFIDKSVNGYLDRQAIRSIFKYNNRYLDREYTTNIF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEECHHHHHHHH
KHNEKYFGNNPIINIYKQIERDLLNLSIWQIYRQSNKYLNNEAIKQIYVPNKNKFIEITK
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCEEEEEE
RWWWLKPTNATDRLIVPNKDYIYNNDLLNNLDYEYLRFNNHPIEWGKDWGVDYKIPPMTI
EEEEECCCCCCCEEEECCCCEEECCHHHCCCCCEEEEECCCCCCCCCCCCCCEECCCEEE
SIEIMLDLTNILIMIWHKNTQSWLSCTGKESIQFIMELIYDWYTLDTSSPNIDYIRAYRW
EEEEEEEECCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCEEHEEE
IKWEAEKVYFLDAKNGLQAIGLLIANLIDYLKQHHFNLVPIWHNPKAMDIERKFNKIATN
EEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCC
GDIIKDLDKLKGKRNYMIETQNFEKKNIFGR
CHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PLHKIPLCSFEYVGDNAFSSGTFIYDTTEKVLKTTEKLFYKETTIEIDKVKENKLFYKQ
CCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHH
LKDNIGKEKNKYLFKEVADIKKQFEKELKLRNKEINKNNTISLDKIKYISINRITSKELD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECEEEEEEEECCCCCCCC
VRKNTDISICYNNKLLGREILQLNKANNLINLSIDRENLQLNKSKDIYTDSIVEKEIFKD
CCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHHHCC
ESLQKLKLGKYINIEKGVGYYFNRSYCKEIDIDKFKFVKKHGNKNINKNKYRFIDRSNLK
CCHHHHHCCCEEEEECCCCCEECCHHHCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCHH
EVAKISNKTMLNKDIIIGIDIDTSINNLKILDLKDIDRNYKTMLMYNIALKYMEKYRIKN
HHHHHHCCEEECCCEEEEEEECCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ALNKIAHKEICKDHNKKYFYKDVFKFIDKSVNGYLDRQAIRSIFKYNNRYLDREYTTNIF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEECHHHHHHHH
KHNEKYFGNNPIINIYKQIERDLLNLSIWQIYRQSNKYLNNEAIKQIYVPNKNKFIEITK
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCEEEEEE
RWWWLKPTNATDRLIVPNKDYIYNNDLLNNLDYEYLRFNNHPIEWGKDWGVDYKIPPMTI
EEEEECCCCCCCEEEECCCCEEECCHHHCCCCCEEEEECCCCCCCCCCCCCCEECCCEEE
SIEIMLDLTNILIMIWHKNTQSWLSCTGKESIQFIMELIYDWYTLDTSSPNIDYIRAYRW
EEEEEEEECCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCEEHEEE
IKWEAEKVYFLDAKNGLQAIGLLIANLIDYLKQHHFNLVPIWHNPKAMDIERKFNKIATN
EEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCC
GDIIKDLDKLKGKRNYMIETQNFEKKNIFGR
CHHHHHHHHHCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA