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The map label for this gene is 226950439

Identifier: 226950439

GI number: 226950439

Start: 3444372

End: 3445151

Strand: Reverse

Name: 226950439

Synonym: CLM_3413

Alternate gene names: NA

Gene position: 3445151-3444372 (Counterclockwise)

Preceding gene: 226950440

Following gene: 226950438

Centisome position: 82.91

GC content: 31.67

Gene sequence:

>780_bases
ATGTTATTCAGTTTAAATCCAGGACATACATTAAGTGGTGGAGATGTAGGAACTAGAGGAATAAATGGACTAAAAGAAGA
AGTTTTAACAAGGCAATTAGTAGATGAAATAGATAAAGAACTAAGAGAGAGAGGACATAGAACTAATATATGTAGAGTAG
ACTATGCACCTACATTACAAGAAAGTTTAAATAAACAAGTAGCCTTATGTAATTCAGTAGATGCAGATTTAAATATTTGT
ATACATTTTAATACTACAGTAGATGGATATGGATCAGAAGTATACACTTATAATGGTAAGTATTTAATAGAAGCAGATAG
AGTATTAAAAGAATTAAATAAACTAGGTTTTAGAAATAGGGGGATCAAAGATCAGCCTTTAGCATTAACTAGAAGAACTA
AAGCTAAAACGATTTATGTAGAGGTATGTTTTATAGATAGTTCTGGAGATGTAGCTATACTTAATAAATATGGAATGAAT
GGAATCGCCAAAGCAATAGTAAATGGTGTTTTAGGAGCATCTTCAAATGTTGAAATTGCATCAGGTAAGGAAAATACAGA
TACGGTATGGATAAATTTAGATGGGAAAACAGGTACTATATGTACTCCAAGTGGTGTAAATGTTAGAGAAAACAAATCTA
CATCTAGTAGAATATTAGGAACCCTTCCCAATGGGGCCAAAGTACAATTATATCGTAAGGAAGGGGAATGGATGCATGTG
TATTATCCTCCACATGGAGGGTATATATATTCTAGATATATAGAGGATGTTTCAAAATAG

Upstream 100 bases:

>100_bases
ATAATTTTTTATTTTCAATTCAGTTATACAAATGATTATAGAAATTATCATTATTATTTAGCTGAAAAATATAATAAAAA
ACACAGGAGGTAATCTTAAT

Downstream 100 bases:

>100_bases
CCTTAATTTTAATGTAGTAAATATAAATAATATATGTAATAAACATATGGATGAGCTTTAGTAGTTCTTAATTTGACGAA
ATTAAAAATTTTTGTAATTC

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: Cell Wall Hydrolase/Autolysin; Bacteriophage Endolysin; Phage Endolysin

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLVDEIDKELRERGHRTNICRVDYAPTLQESLNKQVALCNSVDADLNIC
IHFNTTVDGYGSEVYTYNGKYLIEADRVLKELNKLGFRNRGIKDQPLALTRRTKAKTIYVEVCFIDSSGDVAILNKYGMN
GIAKAIVNGVLGASSNVEIASGKENTDTVWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHV
YYPPHGGYIYSRYIEDVSK

Sequences:

>Translated_259_residues
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLVDEIDKELRERGHRTNICRVDYAPTLQESLNKQVALCNSVDADLNIC
IHFNTTVDGYGSEVYTYNGKYLIEADRVLKELNKLGFRNRGIKDQPLALTRRTKAKTIYVEVCFIDSSGDVAILNKYGMN
GIAKAIVNGVLGASSNVEIASGKENTDTVWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHV
YYPPHGGYIYSRYIEDVSK
>Mature_259_residues
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLVDEIDKELRERGHRTNICRVDYAPTLQESLNKQVALCNSVDADLNIC
IHFNTTVDGYGSEVYTYNGKYLIEADRVLKELNKLGFRNRGIKDQPLALTRRTKAKTIYVEVCFIDSSGDVAILNKYGMN
GIAKAIVNGVLGASSNVEIASGKENTDTVWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHV
YYPPHGGYIYSRYIEDVSK

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.1.28

Molecular weight: Translated: 28654; Mature: 28654

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLVDEIDKELRERGHRTNICRVDYAPTLQ
CEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH
ESLNKQVALCNSVDADLNICIHFNTTVDGYGSEVYTYNGKYLIEADRVLKELNKLGFRNR
HHHCCCEEEECCCCCCEEEEEEEECEECCCCCEEEEECCEEEEEHHHHHHHHHHCCCCCC
GIKDQPLALTRRTKAKTIYVEVCFIDSSGDVAILNKYGMNGIAKAIVNGVLGASSNVEIA
CCCCCCEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEE
SGKENTDTVWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHV
CCCCCCCEEEEEECCCCCCEECCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEE
YYPPHGGYIYSRYIEDVSK
EECCCCCEEHHHHHHHHCC
>Mature Secondary Structure
MLFSLNPGHTLSGGDVGTRGINGLKEEVLTRQLVDEIDKELRERGHRTNICRVDYAPTLQ
CEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH
ESLNKQVALCNSVDADLNICIHFNTTVDGYGSEVYTYNGKYLIEADRVLKELNKLGFRNR
HHHCCCEEEECCCCCCEEEEEEEECEECCCCCEEEEECCEEEEEHHHHHHHHHHCCCCCC
GIKDQPLALTRRTKAKTIYVEVCFIDSSGDVAILNKYGMNGIAKAIVNGVLGASSNVEIA
CCCCCCEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEE
SGKENTDTVWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHV
CCCCCCCEEEEEECCCCCCEECCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEE
YYPPHGGYIYSRYIEDVSK
EECCCCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA