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The map label for this gene is 226950417

Identifier: 226950417

GI number: 226950417

Start: 3423366

End: 3424217

Strand: Reverse

Name: 226950417

Synonym: CLM_3389

Alternate gene names: NA

Gene position: 3424217-3423366 (Counterclockwise)

Preceding gene: 226950418

Following gene: 226950416

Centisome position: 82.41

GC content: 21.95

Gene sequence:

>852_bases
ATGGTAAAAATAAATAAATATTTTATTCCCTATGTGGTATTCTTATTTTATTTAGGATATAAAGGAAGTTTTCTATTATC
AATTTCTGTTGTTTTTGTCCATGAGCTAATTCATTATGTAACAGCCAGATATTTAGGATTTACAGGATTTAATATAGAAA
TTTATCCTTTAGGATTATCCTTAAAATTAGATAAACTAGAAAATGCTAATTTTAAGGAAGATTTATTAATATCATTATCT
GCACCAATAGTTAATATTTTTTTTGCAATAATTTTTTGTATAGCTTATGGAGTATATAATAATAACAGTTTATACTTATT
ATATAAAAGTAATTTGATAATAGGTGTTTTTAATCTTATGCCAGCTCTTCCACTAGATGGTGGAAGAATACTAAGAGATT
TATTATGTTTTAAAACTTTTTATAGAAGGGCAAATGAGATCACTATAAACATTAGTATTGGTATAAGTGTTTTTTTTATG
GTATTATATATTTTTTTATTTATGAAGGGTTATAATAATTTTAATTTAGGTATAATATCCTTATTTATAACAGGATTTTC
ATTAAAGGAAAAGGAAAGGGTAGCTTATATTATTATGAGGCATATAGTCAAAAAGCGATGTAAATTTATAAAGAGGGGAT
ACATTGAAAATCAAAATGTGTCTGTTCATTATAATAATACTTTATTACAAACACTTTCACTTATAGATAAAAATAAATAT
TATATATTTGCAGTGCTAGACGATAATATGAAAATATTAGATACTTTATATGAAAATGAAATATTAGAAGCTTTAAAAAA
CTATGGTAATATAAAAATAGGTGAATTTATTAATATAAAAAGTAAAAAATAA

Upstream 100 bases:

>100_bases
AGAGAATAAAAATCCACAAGATTATTTTTCAAATATAAAAGAATAAAAGTAATGTATAGTGAATATTGTAGTAGATGTAA
GCAATTCTTAAGAGGCAAAC

Downstream 100 bases:

>100_bases
ATAAGGAAGCTTTTATAAGCATGGATAGGACAATGGATTCTTTTGTAATTGTTTTTATCCATGCTTATGTGTTAAAATGT
AATAATGTGATAAACCATGA

Product: putative metalloprotease

Products: NA

Alternate protein names: Site-2-type intermembrane protease [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MVKINKYFIPYVVFLFYLGYKGSFLLSISVVFVHELIHYVTARYLGFTGFNIEIYPLGLSLKLDKLENANFKEDLLISLS
APIVNIFFAIIFCIAYGVYNNNSLYLLYKSNLIIGVFNLMPALPLDGGRILRDLLCFKTFYRRANEITINISIGISVFFM
VLYIFLFMKGYNNFNLGIISLFITGFSLKEKERVAYIIMRHIVKKRCKFIKRGYIENQNVSVHYNNTLLQTLSLIDKNKY
YIFAVLDDNMKILDTLYENEILEALKNYGNIKIGEFINIKSKK

Sequences:

>Translated_283_residues
MVKINKYFIPYVVFLFYLGYKGSFLLSISVVFVHELIHYVTARYLGFTGFNIEIYPLGLSLKLDKLENANFKEDLLISLS
APIVNIFFAIIFCIAYGVYNNNSLYLLYKSNLIIGVFNLMPALPLDGGRILRDLLCFKTFYRRANEITINISIGISVFFM
VLYIFLFMKGYNNFNLGIISLFITGFSLKEKERVAYIIMRHIVKKRCKFIKRGYIENQNVSVHYNNTLLQTLSLIDKNKY
YIFAVLDDNMKILDTLYENEILEALKNYGNIKIGEFINIKSKK
>Mature_283_residues
MVKINKYFIPYVVFLFYLGYKGSFLLSISVVFVHELIHYVTARYLGFTGFNIEIYPLGLSLKLDKLENANFKEDLLISLS
APIVNIFFAIIFCIAYGVYNNNSLYLLYKSNLIIGVFNLMPALPLDGGRILRDLLCFKTFYRRANEITINISIGISVFFM
VLYIFLFMKGYNNFNLGIISLFITGFSLKEKERVAYIIMRHIVKKRCKFIKRGYIENQNVSVHYNNTLLQTLSLIDKNKY
YIFAVLDDNMKILDTLYENEILEALKNYGNIKIGEFINIKSKK

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 32952; Mature: 32952

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKINKYFIPYVVFLFYLGYKGSFLLSISVVFVHELIHYVTARYLGFTGFNIEIYPLGLS
CEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCEECCEEEEEEECEE
LKLDKLENANFKEDLLISLSAPIVNIFFAIIFCIAYGVYNNNSLYLLYKSNLIIGVFNLM
EEEECCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHCEECCCEEEEEEECCEEEEHHHHH
PALPLDGGRILRDLLCFKTFYRRANEITINISIGISVFFMVLYIFLFMKGYNNFNLGIIS
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHH
LFITGFSLKEKERVAYIIMRHIVKKRCKFIKRGYIENQNVSVHYNNTLLQTLSLIDKNKY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCE
YIFAVLDDNMKILDTLYENEILEALKNYGNIKIGEFINIKSKK
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCCC
>Mature Secondary Structure
MVKINKYFIPYVVFLFYLGYKGSFLLSISVVFVHELIHYVTARYLGFTGFNIEIYPLGLS
CEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCEECCEEEEEEECEE
LKLDKLENANFKEDLLISLSAPIVNIFFAIIFCIAYGVYNNNSLYLLYKSNLIIGVFNLM
EEEECCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHCEECCCEEEEEEECCEEEEHHHHH
PALPLDGGRILRDLLCFKTFYRRANEITINISIGISVFFMVLYIFLFMKGYNNFNLGIIS
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHH
LFITGFSLKEKERVAYIIMRHIVKKRCKFIKRGYIENQNVSVHYNNTLLQTLSLIDKNKY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCE
YIFAVLDDNMKILDTLYENEILEALKNYGNIKIGEFINIKSKK
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]