Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is yqeY [H]
Identifier: 226950378
GI number: 226950378
Start: 3379810
End: 3380256
Strand: Reverse
Name: yqeY [H]
Synonym: CLM_3347
Alternate gene names: 226950378
Gene position: 3380256-3379810 (Counterclockwise)
Preceding gene: 226950379
Following gene: 226950377
Centisome position: 81.35
GC content: 31.99
Gene sequence:
>447_bases ATGTCTCTTAAGGAAACACTACAAGACCACTGGAAACAAGCCTTAAAAGCTAAAGAGAAAGAGAAAGCTAGTACTATAAG CATGGTTAAAGCTGCCATTCTTTTAGCAGAAAAAAATTCAGGGAAAACTCTTGAAGATTCAGAAATAATAGATATTCTAT CTAAAGAGATAAAACAACGCAAAGAAGCGTTAGAAGACTTCAAGAAGGGAAACAGACAAGACTTAGTAGATGCAACTAAT TTTGAAATAGAAGTTTTGCTAAAATACCTTCCTCAGCAGTTGACAGAAGAGGAAATTACAGAAATAATTGAAAAAGCAGT TAATGAAACTGGTGCAAATAGCATGAAACATATGAAAAATGTCATGAGTATAGTTATCCCTAAAACTAAAGGTAGAGCAG ATGGTAAACTTGTAAGTGAAAAAGTAAAAAATATATTGAGTAAATAG
Upstream 100 bases:
>100_bases GCCAAGTGTAAAGAAAAAAAAGAAATCTGAAGCTGCAAGAAAGAGAAAATTTAAGTAGTTATAATTAATAGATTTCTTTG AAAGAGGGTATTAGATAATA
Downstream 100 bases:
>100_bases TAAAAGCTGAGTAAAACTCAGCTTTTTATATTATATACATAGGCTCATTTGTCATTTATTAAAAAATGCTTTCATAAATT AATATGAAAGTATTTTTTTA
Product: GatB/Yqey domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSLKETLQDHWKQALKAKEKEKASTISMVKAAILLAEKNSGKTLEDSEIIDILSKEIKQRKEALEDFKKGNRQDLVDATN FEIEVLLKYLPQQLTEEEITEIIEKAVNETGANSMKHMKNVMSIVIPKTKGRADGKLVSEKVKNILSK
Sequences:
>Translated_148_residues MSLKETLQDHWKQALKAKEKEKASTISMVKAAILLAEKNSGKTLEDSEIIDILSKEIKQRKEALEDFKKGNRQDLVDATN FEIEVLLKYLPQQLTEEEITEIIEKAVNETGANSMKHMKNVMSIVIPKTKGRADGKLVSEKVKNILSK >Mature_147_residues SLKETLQDHWKQALKAKEKEKASTISMVKAAILLAEKNSGKTLEDSEIIDILSKEIKQRKEALEDFKKGNRQDLVDATNF EIEVLLKYLPQQLTEEEITEIIEKAVNETGANSMKHMKNVMSIVIPKTKGRADGKLVSEKVKNILSK
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16737; Mature: 16605
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKETLQDHWKQALKAKEKEKASTISMVKAAILLAEKNSGKTLEDSEIIDILSKEIKQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH KEALEDFKKGNRQDLVDATNFEIEVLLKYLPQQLTEEEITEIIEKAVNETGANSMKHMKN HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH VMSIVIPKTKGRADGKLVSEKVKNILSK HHHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLKETLQDHWKQALKAKEKEKASTISMVKAAILLAEKNSGKTLEDSEIIDILSKEIKQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH KEALEDFKKGNRQDLVDATNFEIEVLLKYLPQQLTEEEITEIIEKAVNETGANSMKHMKN HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH VMSIVIPKTKGRADGKLVSEKVKNILSK HHHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]