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The map label for this gene is 226950354

Identifier: 226950354

GI number: 226950354

Start: 3350597

End: 3350941

Strand: Reverse

Name: 226950354

Synonym: CLM_3321

Alternate gene names: NA

Gene position: 3350941-3350597 (Counterclockwise)

Preceding gene: 226950355

Following gene: 226950350

Centisome position: 80.64

GC content: 31.88

Gene sequence:

>345_bases
ATGATCAAAAAACCATTAATAAAAAATATAGACTTTGCAAAACCGATAGAAATGGAATCTTTAGTAAATTATGAAGAAGG
TACGGTAGTAAGTAGAACTCTGGCACAAGGAAAACCACTAAGCGTGACTTTATTTGCCTTTGATAAGGGCGAAGAAATAA
GTTCTCATTCAGCTTCAGGAGATGCTATGGTTTATATTTTAGATGGTGAAGCAGAAATAACTATAGGGGAAGAAAAGTTT
AATGTTAAAAAAGGAGAAACTATAGTAATGCCGTCTAATGTACCCCATGCATTATTAGCTACAGAAAGATTTAAAATGCT
TTTAACTGTAGTCTTTAGTTTATAA

Upstream 100 bases:

>100_bases
TAGTTACGGAATTTTTAATTGAAAAATATTAATATATAGATATAGAAAATGTAATTCTTTAGTTTATGCTATAAGAAAGA
TTTGAAGGAGGAGTTATTAT

Downstream 100 bases:

>100_bases
TAAATTTATAATTTTTAAGTGAAAATTTAATTAGTTAAATGTTACTTAGCAGAAAAATATATAAGTTATGTTTGTAAGAT
TTTTAAAATTATAAATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; 5-Nucleotidase SurE; Cytoplasmic Protein; Cupin Domain Containing Protein; Cupin Domain Protein; Cupin Superfamily Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin Domain-Containing Protein

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIKKPLIKNIDFAKPIEMESLVNYEEGTVVSRTLAQGKPLSVTLFAFDKGEEISSHSASGDAMVYILDGEAEITIGEEKF
NVKKGETIVMPSNVPHALLATERFKMLLTVVFSL

Sequences:

>Translated_114_residues
MIKKPLIKNIDFAKPIEMESLVNYEEGTVVSRTLAQGKPLSVTLFAFDKGEEISSHSASGDAMVYILDGEAEITIGEEKF
NVKKGETIVMPSNVPHALLATERFKMLLTVVFSL
>Mature_114_residues
MIKKPLIKNIDFAKPIEMESLVNYEEGTVVSRTLAQGKPLSVTLFAFDKGEEISSHSASGDAMVYILDGEAEITIGEEKF
NVKKGETIVMPSNVPHALLATERFKMLLTVVFSL

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12546; Mature: 12546

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKPLIKNIDFAKPIEMESLVNYEEGTVVSRTLAQGKPLSVTLFAFDKGEEISSHSASG
CCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEHHHCCCCCEEEEEEECCCCCCCCCCCCC
DAMVYILDGEAEITIGEEKFNVKKGETIVMPSNVPHALLATERFKMLLTVVFSL
CEEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKKPLIKNIDFAKPIEMESLVNYEEGTVVSRTLAQGKPLSVTLFAFDKGEEISSHSASG
CCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEHHHCCCCCEEEEEEECCCCCCCCCCCCC
DAMVYILDGEAEITIGEEKFNVKKGETIVMPSNVPHALLATERFKMLLTVVFSL
CEEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA