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The map label for this gene is 226950328

Identifier: 226950328

GI number: 226950328

Start: 3322933

End: 3323799

Strand: Direct

Name: 226950328

Synonym: CLM_3293

Alternate gene names: NA

Gene position: 3322933-3323799 (Clockwise)

Preceding gene: 226950327

Following gene: 226950329

Centisome position: 79.97

GC content: 28.49

Gene sequence:

>867_bases
GTGTTTATCTATTCATTATCTCCTGAAAAACTAATTGCATGGAATAACAAGATTCCTAAAAAATCTCTTAAATATCTTAC
CGAAGATATGGCCAAACTTCCTGTAGCTGGTAGCCTACAAGGTAAAAAATCAGGCAACATAGAAGAAATATCTAAGTTAA
AGCCTGATATAGTAATATCTATGGGAGATATAAACGATTCAACTATATCTCAAGTAGAAAAATTTCAAAAGCAATCAAAT
ATACCTTTTATACTTGTAGATGGTAAAATGGATAAATTACCTGAAGCCTATAAATTTGTAGGTGACTTATTAAATAAAAA
AGAGAAAGCTAAAGAACTTGCTCTTTATTGTGAAAAGACTCTTAAATCATCAAAGGAAATCACAAATAATATCAAAGAAG
ATAAAAAAATAAAAGTTTATTATGCTGAGGGTCCTAAAGGTTTAGAAACAGATCCAGAAGGTTCTCTTCATTCAGAAGTT
ATAAGCTATGCTGGTGGAAAGAATGTAGCTAATTTTCCTGTAAAACATGGTTCACAAAATACTGTATCTATGGAACAGAT
TATATCCTGGAATCCTGATGTTATTGTTTCAGATTCAAATGTATTTAACGATAGTTCATGGAAACAAGTTTCTGCAGTAA
AACAAAATAAAATATATATGATTCCAAACTTACCATTTAACTGGTTTGATAAGCCACCATCAATAAATAGACTTATAGGA
ATAAGATGGTTTCAATCCTGTTTATATCCGGATTTATATAAAGGAGATATTAATAAAGATACTAAAGAATTTTTCAAACT
ATTTTATCATAAAGATCTTTCCGATGAGGAAGTTAATGATCTTTTAAAAACAAATATATCTAAATAA

Upstream 100 bases:

>100_bases
TACTTCGAATAACTACAGAACCATAACAGATCAAGCCGGAAGAGAAGTAAAAATCCCTGAAAAAATAGAAAAAATTTATT
GTACAAGTCCCTTAGGATCT

Downstream 100 bases:

>100_bases
ACAAAAAATCCTAGTTCATTTAATAAATGAATTAGGATTTTTCTACTTTTTAGCTGATAAGTCTGATATAATAAAGTAAA
ATTTAATTATATCAAATTTA

Product: putative iron chelate uptake ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MFIYSLSPEKLIAWNNKIPKKSLKYLTEDMAKLPVAGSLQGKKSGNIEEISKLKPDIVISMGDINDSTISQVEKFQKQSN
IPFILVDGKMDKLPEAYKFVGDLLNKKEKAKELALYCEKTLKSSKEITNNIKEDKKIKVYYAEGPKGLETDPEGSLHSEV
ISYAGGKNVANFPVKHGSQNTVSMEQIISWNPDVIVSDSNVFNDSSWKQVSAVKQNKIYMIPNLPFNWFDKPPSINRLIG
IRWFQSCLYPDLYKGDINKDTKEFFKLFYHKDLSDEEVNDLLKTNISK

Sequences:

>Translated_288_residues
MFIYSLSPEKLIAWNNKIPKKSLKYLTEDMAKLPVAGSLQGKKSGNIEEISKLKPDIVISMGDINDSTISQVEKFQKQSN
IPFILVDGKMDKLPEAYKFVGDLLNKKEKAKELALYCEKTLKSSKEITNNIKEDKKIKVYYAEGPKGLETDPEGSLHSEV
ISYAGGKNVANFPVKHGSQNTVSMEQIISWNPDVIVSDSNVFNDSSWKQVSAVKQNKIYMIPNLPFNWFDKPPSINRLIG
IRWFQSCLYPDLYKGDINKDTKEFFKLFYHKDLSDEEVNDLLKTNISK
>Mature_288_residues
MFIYSLSPEKLIAWNNKIPKKSLKYLTEDMAKLPVAGSLQGKKSGNIEEISKLKPDIVISMGDINDSTISQVEKFQKQSN
IPFILVDGKMDKLPEAYKFVGDLLNKKEKAKELALYCEKTLKSSKEITNNIKEDKKIKVYYAEGPKGLETDPEGSLHSEV
ISYAGGKNVANFPVKHGSQNTVSMEQIISWNPDVIVSDSNVFNDSSWKQVSAVKQNKIYMIPNLPFNWFDKPPSINRLIG
IRWFQSCLYPDLYKGDINKDTKEFFKLFYHKDLSDEEVNDLLKTNISK

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 32801; Mature: 32801

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIYSLSPEKLIAWNNKIPKKSLKYLTEDMAKLPVAGSLQGKKSGNIEEISKLKPDIVIS
CEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEE
MGDINDSTISQVEKFQKQSNIPFILVDGKMDKLPEAYKFVGDLLNKKEKAKELALYCEKT
ECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSSKEITNNIKEDKKIKVYYAEGPKGLETDPEGSLHSEVISYAGGKNVANFPVKHGSQN
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
TVSMEQIISWNPDVIVSDSNVFNDSSWKQVSAVKQNKIYMIPNLPFNWFDKPPSINRLIG
CCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHH
IRWFQSCLYPDLYKGDINKDTKEFFKLFYHKDLSDEEVNDLLKTNISK
HHHHHHHCCCCHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MFIYSLSPEKLIAWNNKIPKKSLKYLTEDMAKLPVAGSLQGKKSGNIEEISKLKPDIVIS
CEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEE
MGDINDSTISQVEKFQKQSNIPFILVDGKMDKLPEAYKFVGDLLNKKEKAKELALYCEKT
ECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSSKEITNNIKEDKKIKVYYAEGPKGLETDPEGSLHSEVISYAGGKNVANFPVKHGSQN
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
TVSMEQIISWNPDVIVSDSNVFNDSSWKQVSAVKQNKIYMIPNLPFNWFDKPPSINRLIG
CCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHH
IRWFQSCLYPDLYKGDINKDTKEFFKLFYHKDLSDEEVNDLLKTNISK
HHHHHHHCCCCHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]