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The map label for this gene is yccR [C]

Identifier: 226950269

GI number: 226950269

Start: 3253344

End: 3253604

Strand: Reverse

Name: yccR [C]

Synonym: CLM_3230

Alternate gene names: 226950269

Gene position: 3253604-3253344 (Counterclockwise)

Preceding gene: 226950271

Following gene: 226950268

Centisome position: 78.3

GC content: 32.18

Gene sequence:

>261_bases
ATGGGAGAATTATTAAAGCTACCTAATATAGGAAAAGAAGTTGAAAGGCAGTTAAATAAAGTAGGTATATTTACTTATGA
TGAATTAAAGGATATTGGCACAGAACAAACATGGCTGAAAATACAAGAGATTGATGCCTCTGCGTGTATTCATAGATTGT
TAGCATTGGAAGGCGCAATTCAAGGTGTTAAGAAAACAGCATTATCACAAGAACGAAAAGCAGACCTAAAAGATTTTTAT
AATTGGCATAAATGTAAATAG

Upstream 100 bases:

>100_bases
ACAAAATATGTTATAATTGATTCATGATAATAAGATAAAGTGAAGTAAAAATTATTTGTATGAGACATACAGATAAATAG
TAATTTGAAGGGAGGTTATT

Downstream 100 bases:

>100_bases
TAGTTTATAAGAAAGAGAGTAGATTTATTATGAACATAAAGGGTGTAATATTTGATTTTAATGGAACTATGTTTTATGAT
GGAGAATTTCAAGAAACATC

Product: tfoX domain-containing protein

Products: NA

Alternate protein names: TfoX Domain-Containing Protein; Tfox DomaiN-Containing Protein; TfoX C-Terminal Domain-Containing Protein; TfoX C- Domain Superfamily; TfoX C-Terminal Domain Protein

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MGELLKLPNIGKEVERQLNKVGIFTYDELKDIGTEQTWLKIQEIDASACIHRLLALEGAIQGVKKTALSQERKADLKDFY
NWHKCK

Sequences:

>Translated_86_residues
MGELLKLPNIGKEVERQLNKVGIFTYDELKDIGTEQTWLKIQEIDASACIHRLLALEGAIQGVKKTALSQERKADLKDFY
NWHKCK
>Mature_85_residues
GELLKLPNIGKEVERQLNKVGIFTYDELKDIGTEQTWLKIQEIDASACIHRLLALEGAIQGVKKTALSQERKADLKDFYN
WHKCK

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9872; Mature: 9740

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELLKLPNIGKEVERQLNKVGIFTYDELKDIGTEQTWLKIQEIDASACIHRLLALEGAI
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
QGVKKTALSQERKADLKDFYNWHKCK
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GELLKLPNIGKEVERQLNKVGIFTYDELKDIGTEQTWLKIQEIDASACIHRLLALEGAI
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
QGVKKTALSQERKADLKDFYNWHKCK
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA