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The map label for this gene is ygeT [C]

Identifier: 226950265

GI number: 226950265

Start: 3245698

End: 3246528

Strand: Reverse

Name: ygeT [C]

Synonym: CLM_3222

Alternate gene names: 226950265

Gene position: 3246528-3245698 (Counterclockwise)

Preceding gene: 226950266

Following gene: 226950264

Centisome position: 78.13

GC content: 30.93

Gene sequence:

>831_bases
ATGATACCCTTTGATTTTGAATATTATAAACCTGAAACTATTGAAGAGGCAGTTCAATTATATGCTCAATTGAATGCTAG
GGGAAAAAAGCCCTTATATTACGGTGGTGGAACTGAGATTATAAGTATGGCAAGAGCACATAATGTATATACTGAGGCAG
TAATTGATGTAAAAGGTATTTCTGAATGTAATGTTCAGGAATTAAGAAATAACAAATTGATTATTGGTTCTGCTGTTACA
CTTACGCAAATTGCTGAAGCAAACTTATTCCCTTTGCTTGGGTTAACAGTACAAAGAATTGCAGACCATACTATACAAGA
TAAAATTACACTTGGGGGAAATATAGCGGGAACAATTATATATAGGGAAGCTGTATTACCTCTTTTAATATCTAATAGTG
AAGTTCTTATAGCAGGTTCAAGTGGACAAAAACAGGTTTTACTAAAGGATATATTTGATAAAAGAATACAGCTTAATTAT
GGAGAATTTATAGTAAATGTAGCAGTAGATAGCCGCTTTCTTTCGCTACCATCTTTACATGTAAAAAGAACTAAAAATGA
TAAAATAGACTATCCACTAATTACTCTTGCGGCACTCAAAGATAATAATAGAATAAATATATCCTTTAGTGGAGTTTGCG
ATTATCCATTTAGATCTTCTTTAATTGAAGATTATTTAAATGATACCAGCTTGGCTAATGATATAAGAATTAACAATGCA
ATAAATAGTATACCAGATGTAATATTAAATGATTTAGCTGGATCTGCTAGTTTTAGAAAGTTTATGTTACAAAAAATGCT
CGCAGAAGTTTTAGAAAAACTGGAGGGATAA

Upstream 100 bases:

>100_bases
CTGCATTCGCAAATGCTATATCACATGCAGCTGGGCATGAATTTGATAAACTACCTATAACACCTGAAATAATTTGGAAG
GTTAAGACTGGAGGGAAAAT

Downstream 100 bases:

>100_bases
GTAAATGATGAAGGTATTGGGTAAAACAATAATAACCTTAAATATAAATGGGGAATATAAAGAAGTTGTGGCAAAACCCT
CAGACATTTTACTGCACACC

Product: xanthine dehydrogenase family protein FAD-binding subunit

Products: NA

Alternate protein names: Xanthine Dehydrogenase/Oxidase; Xanthine Dehydrogenase Small Subunit; Xanthine Dehydrogenase; Aerobic-Type CO Dehydrogenase Middle Subunit

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MIPFDFEYYKPETIEEAVQLYAQLNARGKKPLYYGGGTEIISMARAHNVYTEAVIDVKGISECNVQELRNNKLIIGSAVT
LTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTIIYREAVLPLLISNSEVLIAGSSGQKQVLLKDIFDKRIQLNY
GEFIVNVAVDSRFLSLPSLHVKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRSSLIEDYLNDTSLANDIRINNA
INSIPDVILNDLAGSASFRKFMLQKMLAEVLEKLEG

Sequences:

>Translated_276_residues
MIPFDFEYYKPETIEEAVQLYAQLNARGKKPLYYGGGTEIISMARAHNVYTEAVIDVKGISECNVQELRNNKLIIGSAVT
LTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTIIYREAVLPLLISNSEVLIAGSSGQKQVLLKDIFDKRIQLNY
GEFIVNVAVDSRFLSLPSLHVKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRSSLIEDYLNDTSLANDIRINNA
INSIPDVILNDLAGSASFRKFMLQKMLAEVLEKLEG
>Mature_276_residues
MIPFDFEYYKPETIEEAVQLYAQLNARGKKPLYYGGGTEIISMARAHNVYTEAVIDVKGISECNVQELRNNKLIIGSAVT
LTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTIIYREAVLPLLISNSEVLIAGSSGQKQVLLKDIFDKRIQLNY
GEFIVNVAVDSRFLSLPSLHVKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRSSLIEDYLNDTSLANDIRINNA
INSIPDVILNDLAGSASFRKFMLQKMLAEVLEKLEG

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789231, Length=295, Percent_Identity=24.7457627118644, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30698; Mature: 30698

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFDFEYYKPETIEEAVQLYAQLNARGKKPLYYGGGTEIISMARAHNVYTEAVIDVKGI
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCC
SECNVQELRNNKLIIGSAVTLTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTII
CCCCHHHHCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEECCCEEEEEE
YREAVLPLLISNSEVLIAGSSGQKQVLLKDIFDKRIQLNYGEFIVNVAVDSRFLSLPSLH
EHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHEEEECCCEEEEEEECCCHHCCCCEE
VKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRSSLIEDYLNDTSLANDIRINNA
EECCCCCCCCCCEEEEEEECCCCEEEEEECCEECCCHHHHHHHHHHCCCCCCCCEEECHH
INSIPDVILNDLAGSASFRKFMLQKMLAEVLEKLEG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPFDFEYYKPETIEEAVQLYAQLNARGKKPLYYGGGTEIISMARAHNVYTEAVIDVKGI
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCC
SECNVQELRNNKLIIGSAVTLTQIAEANLFPLLGLTVQRIADHTIQDKITLGGNIAGTII
CCCCHHHHCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEECCCEEEEEE
YREAVLPLLISNSEVLIAGSSGQKQVLLKDIFDKRIQLNYGEFIVNVAVDSRFLSLPSLH
EHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHEEEECCCEEEEEEECCCHHCCCCEE
VKRTKNDKIDYPLITLAALKDNNRINISFSGVCDYPFRSSLIEDYLNDTSLANDIRINNA
EECCCCCCCCCCEEEEEEECCCCEEEEEECCEECCCHHHHHHHHHHCCCCCCCCEEECHH
INSIPDVILNDLAGSASFRKFMLQKMLAEVLEKLEG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA