Click here to switch to the map view.

The map label for this gene is 226950257

Identifier: 226950257

GI number: 226950257

Start: 3237999

End: 3238676

Strand: Reverse

Name: 226950257

Synonym: CLM_3212

Alternate gene names: NA

Gene position: 3238676-3237999 (Counterclockwise)

Preceding gene: 226950263

Following gene: 226950256

Centisome position: 77.94

GC content: 30.38

Gene sequence:

>678_bases
ATGTCGAAAAGAATTTCTAATGAAGTAAAATTGATAACTGTTAAAAATATTATAAATAATAGAGTTGGTCTTAGAGAGGC
GGCGCGTAGCCTTGGAATTGCTTATCAAAGTATTCAAAGATGGATTGCTATTTATAAAGGTTTTGGAACAGAAGGATTTA
ATAAAACAAATGGGAATCGTAAATATACCTCTGAATTAAAGCAACAAGCCGTTACTGAGTATCTCGACAGTAATAGTTCT
TTGATGGATATATGTATTAAATATAAAATTCGTTCAAATAATCAACTTCAAGATTGGATTATAAAGTATAATAGTCATAA
TAAACTTAAAACTTCTGGAACTGGAGGAATACATGTTATGACTAAAGGACGTGCTACCACCTATAAAGAACGTATTGAAA
TTATAAAGTACTGTATTGAAAATGGAAATAATTATGCTGAAACTGCTGAAAAATATAAAGTATCTTACCAACAAGTCTAT
TCTTGGATAAAAAAATATCAAACAAAAGACATAGAAGCTTTACAGGACGGCCGTGGTAAATGTAAAAAAGAAAGTGAAAT
GTCTGAGTTAGAAAAGCTAAAAGCTAAAAATAAGCTGCTTGAAGCTGAAAATCGTAGACAACTAATGGAGATAGAATTCC
TAAAAAAGCTTGACGAAGTAGAAAGGAGGCGATTTTAA

Upstream 100 bases:

>100_bases
TAAGAATAAGACTTCATCTTGGTTGTCAAAGGATGATATGCTCCCCTTATGGTAGACACATAAAATAATAAAATGTCTAT
CATAAGGAGGAGTATTTTTT

Downstream 100 bases:

>100_bases
GCCAAGTAAAAAACGAATCAATATACATTGCAATACAAGAGTTACATGATGAAAAAGCATTTCCTATAATAGAATTATGT
GAATTTGCTAGTATTGCACG

Product: transposase

Products: NA

Alternate protein names: Transposase Subfamily; Insertion Element Protein; ISSth1 Transposase IS3 Family; Transposase ISLasa7 IS3 Family; Transposase IS3 Family Protein; IS3 Family Transposase; Transposase IS3 Family

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSKRISNEVKLITVKNIINNRVGLREAARSLGIAYQSIQRWIAIYKGFGTEGFNKTNGNRKYTSELKQQAVTEYLDSNSS
LMDICIKYKIRSNNQLQDWIIKYNSHNKLKTSGTGGIHVMTKGRATTYKERIEIIKYCIENGNNYAETAEKYKVSYQQVY
SWIKKYQTKDIEALQDGRGKCKKESEMSELEKLKAKNKLLEAENRRQLMEIEFLKKLDEVERRRF

Sequences:

>Translated_225_residues
MSKRISNEVKLITVKNIINNRVGLREAARSLGIAYQSIQRWIAIYKGFGTEGFNKTNGNRKYTSELKQQAVTEYLDSNSS
LMDICIKYKIRSNNQLQDWIIKYNSHNKLKTSGTGGIHVMTKGRATTYKERIEIIKYCIENGNNYAETAEKYKVSYQQVY
SWIKKYQTKDIEALQDGRGKCKKESEMSELEKLKAKNKLLEAENRRQLMEIEFLKKLDEVERRRF
>Mature_224_residues
SKRISNEVKLITVKNIINNRVGLREAARSLGIAYQSIQRWIAIYKGFGTEGFNKTNGNRKYTSELKQQAVTEYLDSNSSL
MDICIKYKIRSNNQLQDWIIKYNSHNKLKTSGTGGIHVMTKGRATTYKERIEIIKYCIENGNNYAETAEKYKVSYQQVYS
WIKKYQTKDIEALQDGRGKCKKESEMSELEKLKAKNKLLEAENRRQLMEIEFLKKLDEVERRRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26361; Mature: 26229

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRISNEVKLITVKNIINNRVGLREAARSLGIAYQSIQRWIAIYKGFGTEGFNKTNGNR
CCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
KYTSELKQQAVTEYLDSNSSLMDICIKYKIRSNNQLQDWIIKYNSHNKLKTSGTGGIHVM
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHEEECCCCCEEECCCCCEEEE
TKGRATTYKERIEIIKYCIENGNNYAETAEKYKVSYQQVYSWIKKYQTKDIEALQDGRGK
ECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
CKKESEMSELEKLKAKNKLLEAENRRQLMEIEFLKKLDEVERRRF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKRISNEVKLITVKNIINNRVGLREAARSLGIAYQSIQRWIAIYKGFGTEGFNKTNGNR
CCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
KYTSELKQQAVTEYLDSNSSLMDICIKYKIRSNNQLQDWIIKYNSHNKLKTSGTGGIHVM
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHEEECCCCCEEECCCCCEEEE
TKGRATTYKERIEIIKYCIENGNNYAETAEKYKVSYQQVYSWIKKYQTKDIEALQDGRGK
ECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
CKKESEMSELEKLKAKNKLLEAENRRQLMEIEFLKKLDEVERRRF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA