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The map label for this gene is yccM [C]

Identifier: 226950218

GI number: 226950218

Start: 3184639

End: 3185280

Strand: Direct

Name: yccM [C]

Synonym: CLM_3172

Alternate gene names: 226950218

Gene position: 3184639-3185280 (Clockwise)

Preceding gene: 226950217

Following gene: 226950225

Centisome position: 76.64

GC content: 28.66

Gene sequence:

>642_bases
ATGAAAGTTTCTTTTTTGAATTTCTTGAAAAAATATAGTTATATTATTCTTATATTTTTTATAACAGCAGGTATGTTTAA
TCCTACAATAGCTTTAACAGCTATCATTTGTATGCTAGGTCCTATTTTCTTAGCCCTCTTAGGTAAAGGACGATTTTGGT
GTGGGAATATATGTCCAAGAGGCAGCTTTTTTGACAATGTTATAGTTAATTTTAGTAGAACAAATAAGGTTCCTAGTTTT
TTAAAATCTAAAATCTTTAGAGCAGTCGTCGTTATATTTATGTTTTATATGTTTGGTAGTGGAATATATAGAAACTGGGG
AAATACGATAGGCATAGGTATGGTTTTTTACAGAATGATTGTAATTACAACTTTTATAGGTATTATATTAAGTCTTTTCT
ATAATAATAGAACTTGGTGTAATTTTTGTCCTATGGGAAGTATTGCTTCTCTAATATCTTATTTTAAAGAAGATAGAAAG
AAATTAACTGTGTCTTCAAGTTGTGTTTCTTGTAAACTCTGCAAAACAGCTTGTCCTATGGGCATAGTACCTTATGATTA
TAAAGGTAATCTAATTGATCATCCAGATTGTATACAATGTGGAAAATGCATAAATATTTGTCCTAAAAATTCCATAGGTT
AG

Upstream 100 bases:

>100_bases
GATTGTTTTTATAATATATTCTATTGACATAGTTTTTGTAATATATTAAAATCTTCACATACCCATATGGGGTATGTAAT
TTCTGAAATGAGGTGAGTAA

Downstream 100 bases:

>100_bases
TGAATCTTAAAATATTATATAAGAATCTACGGAGAAAAGATTTTGTAGATTTCTATATAGTAAGATTGAAAGGATTTATC
ACTAAATAGATTTATATGGC

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: Ferredoxin

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKVSFLNFLKKYSYIILIFFITAGMFNPTIALTAIICMLGPIFLALLGKGRFWCGNICPRGSFFDNVIVNFSRTNKVPSF
LKSKIFRAVVVIFMFYMFGSGIYRNWGNTIGIGMVFYRMIVITTFIGIILSLFYNNRTWCNFCPMGSIASLISYFKEDRK
KLTVSSSCVSCKLCKTACPMGIVPYDYKGNLIDHPDCIQCGKCINICPKNSIG

Sequences:

>Translated_213_residues
MKVSFLNFLKKYSYIILIFFITAGMFNPTIALTAIICMLGPIFLALLGKGRFWCGNICPRGSFFDNVIVNFSRTNKVPSF
LKSKIFRAVVVIFMFYMFGSGIYRNWGNTIGIGMVFYRMIVITTFIGIILSLFYNNRTWCNFCPMGSIASLISYFKEDRK
KLTVSSSCVSCKLCKTACPMGIVPYDYKGNLIDHPDCIQCGKCINICPKNSIG
>Mature_213_residues
MKVSFLNFLKKYSYIILIFFITAGMFNPTIALTAIICMLGPIFLALLGKGRFWCGNICPRGSFFDNVIVNFSRTNKVPSF
LKSKIFRAVVVIFMFYMFGSGIYRNWGNTIGIGMVFYRMIVITTFIGIILSLFYNNRTWCNFCPMGSIASLISYFKEDRK
KLTVSSSCVSCKLCKTACPMGIVPYDYKGNLIDHPDCIQCGKCINICPKNSIG

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24051; Mature: 24051

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSFLNFLKKYSYIILIFFITAGMFNPTIALTAIICMLGPIFLALLGKGRFWCGNICPR
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
GSFFDNVIVNFSRTNKVPSFLKSKIFRAVVVIFMFYMFGSGIYRNWGNTIGIGMVFYRMI
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHH
VITTFIGIILSLFYNNRTWCNFCPMGSIASLISYFKEDRKKLTVSSSCVSCKLCKTACPM
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GIVPYDYKGNLIDHPDCIQCGKCINICPKNSIG
CCCCCCCCCCCCCCCCHHHHCCHHCCCCCCCCC
>Mature Secondary Structure
MKVSFLNFLKKYSYIILIFFITAGMFNPTIALTAIICMLGPIFLALLGKGRFWCGNICPR
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
GSFFDNVIVNFSRTNKVPSFLKSKIFRAVVVIFMFYMFGSGIYRNWGNTIGIGMVFYRMI
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHH
VITTFIGIILSLFYNNRTWCNFCPMGSIASLISYFKEDRKKLTVSSSCVSCKLCKTACPM
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GIVPYDYKGNLIDHPDCIQCGKCINICPKNSIG
CCCCCCCCCCCCCCCCHHHHCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA