Click here to switch to the map view.

The map label for this gene is 226950200

Identifier: 226950200

GI number: 226950200

Start: 3164907

End: 3165983

Strand: Reverse

Name: 226950200

Synonym: CLM_3154

Alternate gene names: NA

Gene position: 3165983-3164907 (Counterclockwise)

Preceding gene: 226950201

Following gene: 226950199

Centisome position: 76.19

GC content: 25.63

Gene sequence:

>1077_bases
ATGAAAAGCTTGTTTAAAGATCCTTTGTTTTATAAAGATTGGAAGAGTAGTAAATGGATTTGTTTACTTATGACTTTAAT
TTTATTTTGGGATAAGCCTAATGGTGCTTTTAGTGAGTTGAGTCGCCAAAAATATCAAATGCTTATGGATAAAACCTTTG
TATTCGATAAATGGTGGTTTAATCAACTTTTACTAGGGTGGAATAATGGGAAAAATATACTTGTTCTAGGAGTAATAGTA
TTACTTTGTATATTATTATTCAAAGGAGAAAAACAGGATTCTACCTGTGATTTATTACATTCTATGCCTTTTACAAGAAA
GGATATTATAGTATCCAAAATTAAAGCTGGAATTTTAACGATAACTATACCATTTTTAATTAATTTTATAATAATAACAG
TCTTTTATTTTAACAATAAATCTTATATAGGAAGTTTTTATTCAGATATACCTAAGTTTTATTCTATAAACTTATTATTT
TGTTTATTTTTCTTTATGTTTTTAATGTTTATGCAAAGTATAGTTGGACAATATTTTGCAGCATCTATAATTGCACCAAT
AACTTTATTTGTACCATTTATGTTAGTAACTTATATAGTTGATTTAATAAGATTAAGTGAAGGATTAAGTTATGACAGTC
CTAAATTAATGGCATTAGATCAATTTGTTCGGAGCTTACACATATATGAAATAATGAATACTAAGGCATTAGATAGAGTT
GAAAAGGGACCAGATGGAGAACAAGTAAATAATATTTTTAAATTTATATATGAAAATTTTGATATTAAAATAATGGTTCT
TATAATTTTAGTAGTGGTGTTTGCTATTTTATCAGTAATTATATATAACAGGGTAAAACTAGAGAGAATCAATCAATTAA
TAATATTCAAACCTGTTGAAACAGTATTTAAATTAGGGGTAGGTATATGTATAGGAATGATTTTTTCGCAAATATTTGGA
TATCCAAAGGGGCAAGAACTAGTTGCCAATATGCCACTAATATATATAACTCTATTAATAGGTACAGTTATAGGATATTT
TATAGCGAAACTAGTTGTGAAATTTTGTAGTAGATAA

Upstream 100 bases:

>100_bases
TTGCAAGAGAAATTGTTAGAGGCTGGAGCAGAGTTTGTAGAAGAAATAGATTTAAGTTTAGAGGATATGTTTATATACTC
CATGGAAGGAGGAAAGGAAA

Downstream 100 bases:

>100_bases
GATTTTATAAGGAAAGTGCGGTGCACTTTCCTTAAATAATAAATATGAATTATAAAGGAGTATATTAAATAGTATTTAAA
TTAAATATTATCATGTTGAA

Product: ABC transporter permease

Products: NA

Alternate protein names: Membrane Spanning Protein

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKSLFKDPLFYKDWKSSKWICLLMTLILFWDKPNGAFSELSRQKYQMLMDKTFVFDKWWFNQLLLGWNNGKNILVLGVIV
LLCILLFKGEKQDSTCDLLHSMPFTRKDIIVSKIKAGILTITIPFLINFIIITVFYFNNKSYIGSFYSDIPKFYSINLLF
CLFFFMFLMFMQSIVGQYFAASIIAPITLFVPFMLVTYIVDLIRLSEGLSYDSPKLMALDQFVRSLHIYEIMNTKALDRV
EKGPDGEQVNNIFKFIYENFDIKIMVLIILVVVFAILSVIIYNRVKLERINQLIIFKPVETVFKLGVGICIGMIFSQIFG
YPKGQELVANMPLIYITLLIGTVIGYFIAKLVVKFCSR

Sequences:

>Translated_358_residues
MKSLFKDPLFYKDWKSSKWICLLMTLILFWDKPNGAFSELSRQKYQMLMDKTFVFDKWWFNQLLLGWNNGKNILVLGVIV
LLCILLFKGEKQDSTCDLLHSMPFTRKDIIVSKIKAGILTITIPFLINFIIITVFYFNNKSYIGSFYSDIPKFYSINLLF
CLFFFMFLMFMQSIVGQYFAASIIAPITLFVPFMLVTYIVDLIRLSEGLSYDSPKLMALDQFVRSLHIYEIMNTKALDRV
EKGPDGEQVNNIFKFIYENFDIKIMVLIILVVVFAILSVIIYNRVKLERINQLIIFKPVETVFKLGVGICIGMIFSQIFG
YPKGQELVANMPLIYITLLIGTVIGYFIAKLVVKFCSR
>Mature_358_residues
MKSLFKDPLFYKDWKSSKWICLLMTLILFWDKPNGAFSELSRQKYQMLMDKTFVFDKWWFNQLLLGWNNGKNILVLGVIV
LLCILLFKGEKQDSTCDLLHSMPFTRKDIIVSKIKAGILTITIPFLINFIIITVFYFNNKSYIGSFYSDIPKFYSINLLF
CLFFFMFLMFMQSIVGQYFAASIIAPITLFVPFMLVTYIVDLIRLSEGLSYDSPKLMALDQFVRSLHIYEIMNTKALDRV
EKGPDGEQVNNIFKFIYENFDIKIMVLIILVVVFAILSVIIYNRVKLERINQLIIFKPVETVFKLGVGICIGMIFSQIFG
YPKGQELVANMPLIYITLLIGTVIGYFIAKLVVKFCSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41590; Mature: 41590

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLFKDPLFYKDWKSSKWICLLMTLILFWDKPNGAFSELSRQKYQMLMDKTFVFDKWWF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NQLLLGWNNGKNILVLGVIVLLCILLFKGEKQDSTCDLLHSMPFTRKDIIVSKIKAGILT
HHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHE
ITIPFLINFIIITVFYFNNKSYIGSFYSDIPKFYSINLLFCLFFFMFLMFMQSIVGQYFA
EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASIIAPITLFVPFMLVTYIVDLIRLSEGLSYDSPKLMALDQFVRSLHIYEIMNTKALDRV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKGPDGEQVNNIFKFIYENFDIKIMVLIILVVVFAILSVIIYNRVKLERINQLIIFKPVE
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCHH
TVFKLGVGICIGMIFSQIFGYPKGQELVANMPLIYITLLIGTVIGYFIAKLVVKFCSR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLFKDPLFYKDWKSSKWICLLMTLILFWDKPNGAFSELSRQKYQMLMDKTFVFDKWWF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NQLLLGWNNGKNILVLGVIVLLCILLFKGEKQDSTCDLLHSMPFTRKDIIVSKIKAGILT
HHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHE
ITIPFLINFIIITVFYFNNKSYIGSFYSDIPKFYSINLLFCLFFFMFLMFMQSIVGQYFA
EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASIIAPITLFVPFMLVTYIVDLIRLSEGLSYDSPKLMALDQFVRSLHIYEIMNTKALDRV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKGPDGEQVNNIFKFIYENFDIKIMVLIILVVVFAILSVIIYNRVKLERINQLIIFKPVE
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCHH
TVFKLGVGICIGMIFSQIFGYPKGQELVANMPLIYITLLIGTVIGYFIAKLVVKFCSR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA