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The map label for this gene is yajL [H]

Identifier: 226950181

GI number: 226950181

Start: 3140933

End: 3141484

Strand: Direct

Name: yajL [H]

Synonym: CLM_3135

Alternate gene names: 226950181

Gene position: 3140933-3141484 (Clockwise)

Preceding gene: 226950180

Following gene: 226950186

Centisome position: 75.59

GC content: 30.62

Gene sequence:

>552_bases
ATGACAAAAGTTTTAGTATTTATAGCAGAGGGCTTTGAAGAAATTGAAGCTCTAACTGTAGTAGATGTATTAAGAAGAGC
CAATATTCAATGCGATATGTGCAGTATTACTTCTAATAAAGAAGTAACAGGTGCTCATAATATTTTAGTTAATGTAGATA
AAACTTTAGAAGAAATCAAAACTAATGAATATAATTCTTTAGTTATTCCTGGGGGCATGCCTGGTGCCACTAATTTAAGG
GATAATAATAAAGTAATAGATTTAGTAAAAGAGTTTAATAGGGATGAAAAATTAATAGCTGCCATATGTGCAGGTCCAAT
AGTCTTGAGCAAGGCAAATATAATAAAAGGAAAAGAGGTTACTTCCTATCCTGGTTTTGAAGAGGATTTAAAAGAAGGTA
TTTACAAAGAAGATTTGGTTGTACAAGATGGAAACATAATAACCAGTAGAGGACCTTCTGCAGCAATGTATTTTGCCTTT
AAAATACTAGAAAATTTTAAAAAAGATTCTGCAAAAGAAATAAAAGAAGACATGCTTTTGCACCTTCTTTAA

Upstream 100 bases:

>100_bases
ATAAATAAATTTTTTATATTCAAAAAAAATTAATATTATTCTTTTAATAAATTGTATAAAATTATTATATTAACTTAATA
AGATTAAAGGAGGAACATTT

Downstream 100 bases:

>100_bases
AGAAATTTATGTCTTCTCTATATGATAAAAACTAAATAAAATATTTTCATACTATCCTTACTCCTGATTAAATAAAAAAA
CATATGTGATTATAATTCAT

Product: DJ-1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTKVLVFIAEGFEEIEALTVVDVLRRANIQCDMCSITSNKEVTGAHNILVNVDKTLEEIKTNEYNSLVIPGGMPGATNLR
DNNKVIDLVKEFNRDEKLIAAICAGPIVLSKANIIKGKEVTSYPGFEEDLKEGIYKEDLVVQDGNIITSRGPSAAMYFAF
KILENFKKDSAKEIKEDMLLHLL

Sequences:

>Translated_183_residues
MTKVLVFIAEGFEEIEALTVVDVLRRANIQCDMCSITSNKEVTGAHNILVNVDKTLEEIKTNEYNSLVIPGGMPGATNLR
DNNKVIDLVKEFNRDEKLIAAICAGPIVLSKANIIKGKEVTSYPGFEEDLKEGIYKEDLVVQDGNIITSRGPSAAMYFAF
KILENFKKDSAKEIKEDMLLHLL
>Mature_182_residues
TKVLVFIAEGFEEIEALTVVDVLRRANIQCDMCSITSNKEVTGAHNILVNVDKTLEEIKTNEYNSLVIPGGMPGATNLRD
NNKVIDLVKEFNRDEKLIAAICAGPIVLSKANIIKGKEVTSYPGFEEDLKEGIYKEDLVVQDGNIITSRGPSAAMYFAFK
ILENFKKDSAKEIKEDMLLHLL

Specific function: Involved in biogenesis of ribosomal proteins, probably as a ribosomal protein-folding chaperone. Interacts with ribosomal subunits, ribosomes and polysomes. Confers resistance to oxidative stress [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

Organism=Homo sapiens, GI183227678, Length=183, Percent_Identity=36.0655737704918, Blast_Score=112, Evalue=2e-25,
Organism=Homo sapiens, GI31543380, Length=183, Percent_Identity=36.0655737704918, Blast_Score=112, Evalue=2e-25,
Organism=Escherichia coli, GI87081736, Length=182, Percent_Identity=31.8681318681319, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI87082219, Length=154, Percent_Identity=29.2207792207792, Blast_Score=76, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17531319, Length=184, Percent_Identity=38.0434782608696, Blast_Score=113, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17558714, Length=168, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28571932, Length=184, Percent_Identity=36.4130434782609, Blast_Score=120, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24653499, Length=180, Percent_Identity=40, Blast_Score=115, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006287
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 20322; Mature: 20191

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVLVFIAEGFEEIEALTVVDVLRRANIQCDMCSITSNKEVTGAHNILVNVDKTLEEIK
CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHH
TNEYNSLVIPGGMPGATNLRDNNKVIDLVKEFNRDEKLIAAICAGPIVLSKANIIKGKEV
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEECCCCEECCCCC
TSYPGFEEDLKEGIYKEDLVVQDGNIITSRGPSAAMYFAFKILENFKKDSAKEIKEDMLL
CCCCCCHHHHHCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
HLL
HCC
>Mature Secondary Structure 
TKVLVFIAEGFEEIEALTVVDVLRRANIQCDMCSITSNKEVTGAHNILVNVDKTLEEIK
CEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHH
TNEYNSLVIPGGMPGATNLRDNNKVIDLVKEFNRDEKLIAAICAGPIVLSKANIIKGKEV
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEECCCCEECCCCC
TSYPGFEEDLKEGIYKEDLVVQDGNIITSRGPSAAMYFAFKILENFKKDSAKEIKEDMLL
CCCCCCHHHHHCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
HLL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9592144 [H]