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The map label for this gene is ppaC [H]

Identifier: 226950048

GI number: 226950048

Start: 3002809

End: 3004452

Strand: Direct

Name: ppaC [H]

Synonym: CLM_3001

Alternate gene names: 226950048

Gene position: 3002809-3004452 (Clockwise)

Preceding gene: 226950033

Following gene: 226950086

Centisome position: 72.26

GC content: 29.68

Gene sequence:

>1644_bases
ATGAAAGACCTTATTTATATAACAGGACATAGAAATCCTGATTCTGACTCTATCTGTGCCTCTTTAGGTTATGCAGATTT
AAAAAAACAATTGGGTTATAACAACATAGTATCCGGAAGACTTGGAGAGTTAAATAACGAAACAAAATTTGTTTTAGATT
ATTTCAACGTTAAGGCCCCAACTCTTATAGATACAGTAAAAACACAAGTTTCTGATTTAGATATAGATAAAGTTATTCCT
ATATCTAAGGATTTATCTTTAAAAAAAGCTTGGATCACAATGAAAGAAAATAATGTTAAAACTTTACCTGTACAGGATGA
AGAGGGAAAATTAATTGGTCTAGCTTCCTTATCTAATATAAGCTCTACTTATATGGGAGTATGGCAAAAGGACATATTAG
CTAAAAGTAATGCTAATATAGAAGATATTATAGATACCTTAAATGCTAAGATTGCTTATAAAAGAGAAGACAAACAGAAA
TTCACAGGTAATTTAGTAGTAGCTGCCATGGAAGCTAAAGATATTAAAAATTATATAAAAGAAGGGGATATAGTTATTCT
TGGAAATAGAGATGATGTTCAAGAAGCTGCTTTAGATTGCAAAGCTCATCTATTAGTGGTTACAGGGTCTCATAAAGTAT
CCGATAAAATATTGAATAAAGCAAAAGATTTAGGATGCTCTATATTAATATCAGAGGAGGATACCTTTACAACATCAGTA
CTTATAACTCAAAGTATACCTGTTAGCTATATTATGACTTCTTCTGATATAATGAGTTTTAAACTTTCTGATTTTGTAGA
AGATGTTAAAGAAGTTATGTTAAAAACAAGATTTAGAAGCTATCCTGTAGTAGATCATAACAACAAAATAGTAGGAGCTA
TTTCAAGATATCATTTAATATCACCTAAAAAGAAAAAAGTTATATTAGTAGACCACAATGAAATGGGTCAATCTGTACCA
GGCTTAGAAGAAGCTGAAATAATGGAAATAATAGATCATCATAGAATAGGTGGAGTTAATACTGCATCCCCTATATTCTT
TAGAAATCAACCAGTGGGAAGTACCTCTACTATAATTGCAAATATGTTCTTTGAGAATAATATTACACCATCAAAAGAAA
TAGCCGGTGTATTATCCTCTGCAATTATATCTGATACATTATTATTTAAATCACCAACTTCCACAGAATTAGATAAAAAA
ATCTTAGACAAATTAGCTAAAATAGCAGAAATAGATCCTAAAAGCTATTCCGTAGAGATGTTTAAAGCAGGTACATCCTT
AAAAGGAAAAACTGTAGAAGGATTATTTCATGAAGATTTTAAGAACTTTACTATAGGTGGAGGAAAAATAGGTGTATCTC
AAGTATCCACTATGGATCCTTCAAGTTTCGATCCATTAAAAGAAGATATGTTAAATTTAATGGAATCAAAAATAAAAAAG
GAAGGCTATGAAGGATTAGTTTTAGTGTTAACTGACCTACTAAAGGAAGGTTCTTATATATATGTTATAGGACCTAAAAA
AGAAATTATAGCTTCAGCTTTTGAAAAATCCTTAGATAAAGATAGTTCCTTATATGCTGAGGGAGTATTATCAAGAAAAA
AACAAGTAATACCACCAATTACCAATGCAATAGAAAATAAGTAA

Upstream 100 bases:

>100_bases
TATTAATAAAATTTAGAAATTTGAACTTAATGTTCATTTTTATGATAAAATAGTTAATACTGAAATTTATTATATAAAAT
ATCATTAGGAGGAAATTTAA

Downstream 100 bases:

>100_bases
GCAGCTTTTATTTATTCAAAAGAGTGTGGCTCAAAATAAATTTAATTTTAGTTTGAAGCTCCATCTTTTAAAAATTTATC
ATATCAAATTAATATAATAA

Product: putative manganese-dependent inorganic pyrophosphatase

Products: NA

Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MKDLIYITGHRNPDSDSICASLGYADLKKQLGYNNIVSGRLGELNNETKFVLDYFNVKAPTLIDTVKTQVSDLDIDKVIP
ISKDLSLKKAWITMKENNVKTLPVQDEEGKLIGLASLSNISSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKREDKQK
FTGNLVVAAMEAKDIKNYIKEGDIVILGNRDDVQEAALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV
LITQSIPVSYIMTSSDIMSFKLSDFVEDVKEVMLKTRFRSYPVVDHNNKIVGAISRYHLISPKKKKVILVDHNEMGQSVP
GLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIANMFFENNITPSKEIAGVLSSAIISDTLLFKSPTSTELDKK
ILDKLAKIAEIDPKSYSVEMFKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKEDMLNLMESKIKK
EGYEGLVLVLTDLLKEGSYIYVIGPKKEIIASAFEKSLDKDSSLYAEGVLSRKKQVIPPITNAIENK

Sequences:

>Translated_547_residues
MKDLIYITGHRNPDSDSICASLGYADLKKQLGYNNIVSGRLGELNNETKFVLDYFNVKAPTLIDTVKTQVSDLDIDKVIP
ISKDLSLKKAWITMKENNVKTLPVQDEEGKLIGLASLSNISSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKREDKQK
FTGNLVVAAMEAKDIKNYIKEGDIVILGNRDDVQEAALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV
LITQSIPVSYIMTSSDIMSFKLSDFVEDVKEVMLKTRFRSYPVVDHNNKIVGAISRYHLISPKKKKVILVDHNEMGQSVP
GLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIANMFFENNITPSKEIAGVLSSAIISDTLLFKSPTSTELDKK
ILDKLAKIAEIDPKSYSVEMFKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKEDMLNLMESKIKK
EGYEGLVLVLTDLLKEGSYIYVIGPKKEIIASAFEKSLDKDSSLYAEGVLSRKKQVIPPITNAIENK
>Mature_547_residues
MKDLIYITGHRNPDSDSICASLGYADLKKQLGYNNIVSGRLGELNNETKFVLDYFNVKAPTLIDTVKTQVSDLDIDKVIP
ISKDLSLKKAWITMKENNVKTLPVQDEEGKLIGLASLSNISSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKREDKQK
FTGNLVVAAMEAKDIKNYIKEGDIVILGNRDDVQEAALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV
LITQSIPVSYIMTSSDIMSFKLSDFVEDVKEVMLKTRFRSYPVVDHNNKIVGAISRYHLISPKKKKVILVDHNEMGQSVP
GLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIANMFFENNITPSKEIAGVLSSAIISDTLLFKSPTSTELDKK
ILDKLAKIAEIDPKSYSVEMFKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKEDMLNLMESKIKK
EGYEGLVLVLTDLLKEGSYIYVIGPKKEIIASAFEKSLDKDSSLYAEGVLSRKKQVIPPITNAIENK

Specific function: Unknown

COG id: COG1227

COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001807
- InterPro:   IPR000644
- InterPro:   IPR004097
- InterPro:   IPR010766
- InterPro:   IPR001667 [H]

Pfam domain/function: PF00571 CBS; PF01368 DHH; PF02833 DHHA2; PF07085 DRTGG [H]

EC number: =3.6.1.1 [H]

Molecular weight: Translated: 60489; Mature: 60489

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLIYITGHRNPDSDSICASLGYADLKKQLGYNNIVSGRLGELNNETKFVLDYFNVKAP
CCCEEEEECCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
TLIDTVKTQVSDLDIDKVIPISKDLSLKKAWITMKENNVKTLPVQDEEGKLIGLASLSNI
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCCCCCCCEEEEEEHHHH
SSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKREDKQKFTGNLVVAAMEAKDIKNYIK
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCHHHHHCCCEEEEEECHHHHHHHHC
EGDIVILGNRDDVQEAALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV
CCCEEEECCCCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCEEEEE
LITQSIPVSYIMTSSDIMSFKLSDFVEDVKEVMLKTRFRSYPVVDHNNKIVGAISRYHLI
EEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEHHHEEC
SPKKKKVILVDHNEMGQSVPGLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIA
CCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHE
NMFFENNITPSKEIAGVLSSAIISDTLLFKSPTSTELDKKILDKLAKIAEIDPKSYSVEM
EHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
FKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKEDMLNLMESKIKK
EECCCCCCCCCCHHHHHHCCCCEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EGYEGLVLVLTDLLKEGSYIYVIGPKKEIIASAFEKSLDKDSSLYAEGVLSRKKQVIPPI
CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH
TNAIENK
HHHHCCC
>Mature Secondary Structure
MKDLIYITGHRNPDSDSICASLGYADLKKQLGYNNIVSGRLGELNNETKFVLDYFNVKAP
CCCEEEEECCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
TLIDTVKTQVSDLDIDKVIPISKDLSLKKAWITMKENNVKTLPVQDEEGKLIGLASLSNI
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCCCCCCCEEEEEEHHHH
SSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKREDKQKFTGNLVVAAMEAKDIKNYIK
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCHHHHHCCCEEEEEECHHHHHHHHC
EGDIVILGNRDDVQEAALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV
CCCEEEECCCCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCEEEEE
LITQSIPVSYIMTSSDIMSFKLSDFVEDVKEVMLKTRFRSYPVVDHNNKIVGAISRYHLI
EEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEHHHEEC
SPKKKKVILVDHNEMGQSVPGLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIA
CCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHE
NMFFENNITPSKEIAGVLSSAIISDTLLFKSPTSTELDKKILDKLAKIAEIDPKSYSVEM
EHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
FKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKEDMLNLMESKIKK
EECCCCCCCCCCHHHHHHCCCCEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
EGYEGLVLVLTDLLKEGSYIYVIGPKKEIIASAFEKSLDKDSSLYAEGVLSRKKQVIPPI
CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH
TNAIENK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]