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The map label for this gene is 226949929

Identifier: 226949929

GI number: 226949929

Start: 2886506

End: 2887090

Strand: Direct

Name: 226949929

Synonym: CLM_2881

Alternate gene names: NA

Gene position: 2886506-2887090 (Clockwise)

Preceding gene: 226949907

Following gene: 226949933

Centisome position: 69.47

GC content: 29.06

Gene sequence:

>585_bases
ATGACTAAAATAATTGATTGTAAAGGACTAAAATGTCCTCAACCTGTAATCAACACAAAAAAATATTTTGATTCTATAGA
AGAAGGACAAGCTACTACTATAGTAGACAATGAGGTTGCTAAAAATAATATTATAAAGCTTGCTGAAAAAAATGGTTTTA
AAAGCGAAGTAGAAGAAAAGGATTCTCTATATTACATAACTATGGCCAAAGAACATTGCGTTGCTTGTGAGGCAATTTTA
TCTAATGAAAAAAAATTAGTTATGGTTATTTCTAAAAATGTTCTTGGTGGTGGCGATGATAAATTAGGAACTGCTCTAAT
GAAAAGTTATTTATATGCTTTATCCGAAAGCGATAACCTTCCTTCTCATTTATTATTTTTAAATGGTGGGGTTAAACTTA
CAATAGAAGATTCTGAATGCCTTGAAAGTATACAATCTCTAAAAGATAAAGGTGTTACTATACTAAGCTGTGGAACTTGT
CTTGATTTCTATGGTATAAAAAGCAAACTTAAAGTTGGAGAAATAACAAATATGTACACTATAGTAGAAGAAATGACTTC
TGCAGATAATACTATATTTATCTAA

Upstream 100 bases:

>100_bases
ATAGTTTTACCATCATCTATAAGTATTATCTATAAGTCCACTGGTAAATTTGTGATATAATTAAAAGGATAACTAAGATT
TATTTTAGGAGGCTAAAAAT

Downstream 100 bases:

>100_bases
ATAAAATTTGTTTGTATAACTTATAATTATGTAACCTCCATAAACCCACACTGTCATAATTATAAGTATATAATAAAAGC
AGGAATTTTCAATTCCTGCT

Product: selenium metabolism protein YedF

Products: NA

Alternate protein names: SirA Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; SirA-Like Protein; Transcriptional Regulator; Cytoplasmic Protein; Redox Protein; Selenium Metabolism Protein Yedf; SirA-Like

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTKIIDCKGLKCPQPVINTKKYFDSIEEGQATTIVDNEVAKNNIIKLAEKNGFKSEVEEKDSLYYITMAKEHCVACEAIL
SNEKKLVMVISKNVLGGGDDKLGTALMKSYLYALSESDNLPSHLLFLNGGVKLTIEDSECLESIQSLKDKGVTILSCGTC
LDFYGIKSKLKVGEITNMYTIVEEMTSADNTIFI

Sequences:

>Translated_194_residues
MTKIIDCKGLKCPQPVINTKKYFDSIEEGQATTIVDNEVAKNNIIKLAEKNGFKSEVEEKDSLYYITMAKEHCVACEAIL
SNEKKLVMVISKNVLGGGDDKLGTALMKSYLYALSESDNLPSHLLFLNGGVKLTIEDSECLESIQSLKDKGVTILSCGTC
LDFYGIKSKLKVGEITNMYTIVEEMTSADNTIFI
>Mature_193_residues
TKIIDCKGLKCPQPVINTKKYFDSIEEGQATTIVDNEVAKNNIIKLAEKNGFKSEVEEKDSLYYITMAKEHCVACEAILS
NEKKLVMVISKNVLGGGDDKLGTALMKSYLYALSESDNLPSHLLFLNGGVKLTIEDSECLESIQSLKDKGVTILSCGTCL
DFYGIKSKLKVGEITNMYTIVEEMTSADNTIFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21383; Mature: 21252

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIIDCKGLKCPQPVINTKKYFDSIEEGQATTIVDNEVAKNNIIKLAEKNGFKSEVEEK
CCEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHCCEEEEECCCCCHHHHCCC
DSLYYITMAKEHCVACEAILSNEKKLVMVISKNVLGGGDDKLGTALMKSYLYALSESDNL
CCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PSHLLFLNGGVKLTIEDSECLESIQSLKDKGVTILSCGTCLDFYGIKSKLKVGEITNMYT
CCEEEEEECCEEEEECCHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCHHHHHHHHH
IVEEMTSADNTIFI
HHHHHHCCCCEEEC
>Mature Secondary Structure 
TKIIDCKGLKCPQPVINTKKYFDSIEEGQATTIVDNEVAKNNIIKLAEKNGFKSEVEEK
CEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHCCEEEEECCCCCHHHHCCC
DSLYYITMAKEHCVACEAILSNEKKLVMVISKNVLGGGDDKLGTALMKSYLYALSESDNL
CCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PSHLLFLNGGVKLTIEDSECLESIQSLKDKGVTILSCGTCLDFYGIKSKLKVGEITNMYT
CCEEEEEECCEEEEECCHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCHHHHHHHHH
IVEEMTSADNTIFI
HHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA