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The map label for this gene is yifB [H]

Identifier: 226949792

GI number: 226949792

Start: 2747526

End: 2749049

Strand: Direct

Name: yifB [H]

Synonym: CLM_2732

Alternate gene names: 226949792

Gene position: 2747526-2749049 (Clockwise)

Preceding gene: 226949749

Following gene: 226949793

Centisome position: 66.12

GC content: 30.91

Gene sequence:

>1524_bases
GTGACTAGTAAAGTTATTACAGCTACCTTAAATGGAGCCTGCTGTAATTTAATATCTGTAGAAGTAGATATAAGTCATGG
TCTTCCTGCCTTTAATATAGTAGGTCTTGCAGATACCTCCGTTAAAGAATCTAAAGAAAGGGTAAAATCCGCAATAACAA
ACTCAGGTTATCAGTTTCCTATAAGCAAAATAACTGTAAATCTATCCCCTGCTGATATAAAAAAAGAAGGTTCTTCCTTT
GATTTACCCATAGCTCTTGCTATATTAGCTGCTACAGAGCAAATCAATGGCGAATCCTTAAAAAACTATATAATTCTAGG
AGAACTTTCACTGTTTGGAGAAATAAATAAAATAAGGGGTGCTCTTCCTATAGCCTTAGAAGCTTTGGACAACAATTATC
TCAACTTTATAGTTCCTATAAGTAATGCTAACGAATGCGCTATGCTAGATAAAATAAATGTTTATCCTTTTTCCTCCTTA
AAAGAAGTTATTCATTTCATTTGCTACAAAGATTTGCTTCCATATAAGATCGATACCGAAAATATAGTTCCTAATAAAGT
AAAAGAAAAAGATTTTTCCGAAATAACTGGTCAAGAAAGCTCAAAAAGAGCTTTAGAAATAGCTGCGGCGGGAGCTCACA
ATGTGATAATGTCCGGTCCTCCTGGTTGTGGTAAAACTATGCTAGCTGAAAGATTTCCTTCTATAATTCCTGACTTAAAT
TATGAAGAATCTTTGGAAGTTACTAAAATATATAGTATTGCTGGCAAATTGGATAAAAATGGTTCATTAATAACCAAAAG
ACCTTTTAGAAATCCTCATAGTACTTCTTCTCAGGCAGCTTTAACAGGAGGTGGAATGAATTTAATTCCAGGGGAAATCT
CTCTAGCACACAACGGAGTTTTATTTTTAGATGAAATATTAGAATTTAAGAAATCAGTATTGGAAGCTTTAAGGCAACCT
TTAGAGGATAAAAAAATAACTATAAGCAGGTTTAATGGTGCTGCTACTTATAACTCAAATTTTATATTACTCGGAACTTT
AAATCCCTGTCCCTGTGGCTTCTTAGGTTCTGAAAAACCTTGTAGTTGTAGTGATTATGAAATTAAAAGATACTTAAATA
AACTTTCTGGACCTCTTTTGGATAGAATTGATATTTTTACTTTTGTTCCTTCTTTATCCTATACTGAAATTAAAAGTAAT
AACAATTCAGAATCCTCTGATATAATAAAAGAAAGAGTAAATACAGCACGAAAAATACAAGAGAAAAGATTTCTTAATGA
AGGAATTTATACTAACTCCCAAATGAAAAGAATTCATTTAAAAAAATACTGTAGTTTAAATATAGAAGCTTCTAATATAT
TAGAGAAAATATATGACAGGTTTAATTTAAGTGTTCGATCCTATGGCCGTATACTTAAAGTTGCTAGAACTATAGCTGAT
TTAAACAATAATGAAAAAATTGAAAAGGAAGATATTATAGAAGCTTTGCAATATAGAAAATTTGTAAATAATGATATACT
CTAA

Upstream 100 bases:

>100_bases
TATATTTAAATAAATAGTCAATAATCTATATAATATAAAGATATATTCTTTTAAATTATGTATGAAATAAAATATATATT
AAATTTATGAGGTGATTTTT

Downstream 100 bases:

>100_bases
TGAAAGGTGATATTTATGCACTACTGTAATAAGGATATTGGCTCTTTTGGTGAAACTATAGCTGTTGACTATATTAAAAA
TTGTGGATATATTATATTAG

Product: putative Mg chelatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTSKVITATLNGACCNLISVEVDISHGLPAFNIVGLADTSVKESKERVKSAITNSGYQFPISKITVNLSPADIKKEGSSF
DLPIALAILAATEQINGESLKNYIILGELSLFGEINKIRGALPIALEALDNNYLNFIVPISNANECAMLDKINVYPFSSL
KEVIHFICYKDLLPYKIDTENIVPNKVKEKDFSEITGQESSKRALEIAAAGAHNVIMSGPPGCGKTMLAERFPSIIPDLN
YEESLEVTKIYSIAGKLDKNGSLITKRPFRNPHSTSSQAALTGGGMNLIPGEISLAHNGVLFLDEILEFKKSVLEALRQP
LEDKKITISRFNGAATYNSNFILLGTLNPCPCGFLGSEKPCSCSDYEIKRYLNKLSGPLLDRIDIFTFVPSLSYTEIKSN
NNSESSDIIKERVNTARKIQEKRFLNEGIYTNSQMKRIHLKKYCSLNIEASNILEKIYDRFNLSVRSYGRILKVARTIAD
LNNNEKIEKEDIIEALQYRKFVNNDIL

Sequences:

>Translated_507_residues
MTSKVITATLNGACCNLISVEVDISHGLPAFNIVGLADTSVKESKERVKSAITNSGYQFPISKITVNLSPADIKKEGSSF
DLPIALAILAATEQINGESLKNYIILGELSLFGEINKIRGALPIALEALDNNYLNFIVPISNANECAMLDKINVYPFSSL
KEVIHFICYKDLLPYKIDTENIVPNKVKEKDFSEITGQESSKRALEIAAAGAHNVIMSGPPGCGKTMLAERFPSIIPDLN
YEESLEVTKIYSIAGKLDKNGSLITKRPFRNPHSTSSQAALTGGGMNLIPGEISLAHNGVLFLDEILEFKKSVLEALRQP
LEDKKITISRFNGAATYNSNFILLGTLNPCPCGFLGSEKPCSCSDYEIKRYLNKLSGPLLDRIDIFTFVPSLSYTEIKSN
NNSESSDIIKERVNTARKIQEKRFLNEGIYTNSQMKRIHLKKYCSLNIEASNILEKIYDRFNLSVRSYGRILKVARTIAD
LNNNEKIEKEDIIEALQYRKFVNNDIL
>Mature_506_residues
TSKVITATLNGACCNLISVEVDISHGLPAFNIVGLADTSVKESKERVKSAITNSGYQFPISKITVNLSPADIKKEGSSFD
LPIALAILAATEQINGESLKNYIILGELSLFGEINKIRGALPIALEALDNNYLNFIVPISNANECAMLDKINVYPFSSLK
EVIHFICYKDLLPYKIDTENIVPNKVKEKDFSEITGQESSKRALEIAAAGAHNVIMSGPPGCGKTMLAERFPSIIPDLNY
EESLEVTKIYSIAGKLDKNGSLITKRPFRNPHSTSSQAALTGGGMNLIPGEISLAHNGVLFLDEILEFKKSVLEALRQPL
EDKKITISRFNGAATYNSNFILLGTLNPCPCGFLGSEKPCSCSDYEIKRYLNKLSGPLLDRIDIFTFVPSLSYTEIKSNN
NSESSDIIKERVNTARKIQEKRFLNEGIYTNSQMKRIHLKKYCSLNIEASNILEKIYDRFNLSVRSYGRILKVARTIADL
NNNEKIEKEDIIEALQYRKFVNNDIL

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=490, Percent_Identity=42.0408163265306, Blast_Score=371, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568
- InterPro:   IPR002078 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 56239; Mature: 56108

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKVITATLNGACCNLISVEVDISHGLPAFNIVGLADTSVKESKERVKSAITNSGYQFP
CCCCEEEEECCCCEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEE
ISKITVNLSPADIKKEGSSFDLPIALAILAATEQINGESLKNYIILGELSLFGEINKIRG
EEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCEEEEEEHHHHHHHHHHCC
ALPIALEALDNNYLNFIVPISNANECAMLDKINVYPFSSLKEVIHFICYKDLLPYKIDTE
CCHHHHEECCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEECCC
NIVPNKVKEKDFSEITGQESSKRALEIAAAGAHNVIMSGPPGCGKTMLAERFPSIIPDLN
CCCCCCHHHCHHHHHCCCCCCHHEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCC
YEESLEVTKIYSIAGKLDKNGSLITKRPFRNPHSTSSQAALTGGGMNLIPGEISLAHNGV
CCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEECCCCEECCCCEEECCCCC
LFLDEILEFKKSVLEALRQPLEDKKITISRFNGAATYNSNFILLGTLNPCPCGFLGSEKP
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCC
CSCSDYEIKRYLNKLSGPLLDRIDIFTFVPSLSYTEIKSNNNSESSDIIKERVNTARKIQ
CCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
EKRFLNEGIYTNSQMKRIHLKKYCSLNIEASNILEKIYDRFNLSVRSYGRILKVARTIAD
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LNNNEKIEKEDIIEALQYRKFVNNDIL
CCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSKVITATLNGACCNLISVEVDISHGLPAFNIVGLADTSVKESKERVKSAITNSGYQFP
CCCEEEEECCCCEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEE
ISKITVNLSPADIKKEGSSFDLPIALAILAATEQINGESLKNYIILGELSLFGEINKIRG
EEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCEEEEEEHHHHHHHHHHCC
ALPIALEALDNNYLNFIVPISNANECAMLDKINVYPFSSLKEVIHFICYKDLLPYKIDTE
CCHHHHEECCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEECCC
NIVPNKVKEKDFSEITGQESSKRALEIAAAGAHNVIMSGPPGCGKTMLAERFPSIIPDLN
CCCCCCHHHCHHHHHCCCCCCHHEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCC
YEESLEVTKIYSIAGKLDKNGSLITKRPFRNPHSTSSQAALTGGGMNLIPGEISLAHNGV
CCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEECCCCEECCCCEEECCCCC
LFLDEILEFKKSVLEALRQPLEDKKITISRFNGAATYNSNFILLGTLNPCPCGFLGSEKP
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCC
CSCSDYEIKRYLNKLSGPLLDRIDIFTFVPSLSYTEIKSNNNSESSDIIKERVNTARKIQ
CCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
EKRFLNEGIYTNSQMKRIHLKKYCSLNIEASNILEKIYDRFNLSVRSYGRILKVARTIAD
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LNNNEKIEKEDIIEALQYRKFVNNDIL
CCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]