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The map label for this gene is 226949688

Identifier: 226949688

GI number: 226949688

Start: 2654321

End: 2654569

Strand: Direct

Name: 226949688

Synonym: CLM_2628

Alternate gene names: NA

Gene position: 2654321-2654569 (Clockwise)

Preceding gene: 226949681

Following gene: 226949689

Centisome position: 63.88

GC content: 28.51

Gene sequence:

>249_bases
TTGGTATTTAAAGATAGACTTAAAGGATTGCGGGAAGATAGAGATTTAACTCAAGATCAAATCGCAAATATTCTTAAAAT
AACACGCTCTGCTGTAGCTAACTATGAAAACGGTATTCGTGAGCCTGACATTTCCTTATTAGTAAAAATAGCTGATTATT
TTAATATATCCCTAGACTATCTTTTGTGTAGGACAAATAAAATGGAACCATTTTATAAATCTCATTCTAATAATTTAAAG
ATTAAATAA

Upstream 100 bases:

>100_bases
GTTCTATAAATTTATTTTATTTTTATATTTAGTCACACAATGTGGCATTGATTATTACCAATAATCTCTAATGATAAAAT
TTTTATTTGAGGTGATTATA

Downstream 100 bases:

>100_bases
ATTTATTTTTGTGTAGCTGCATCTTACAGGTATATAATAGCACAAAAAGTGTTCACTGCGAGCGATATTTTCGACCAAAA
TTTGTATAGGCGATATTCAA

Product: DNA-binding protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator; Prophage

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MVFKDRLKGLREDRDLTQDQIANILKITRSAVANYENGIREPDISLLVKIADYFNISLDYLLCRTNKMEPFYKSHSNNLK
IK

Sequences:

>Translated_82_residues
MVFKDRLKGLREDRDLTQDQIANILKITRSAVANYENGIREPDISLLVKIADYFNISLDYLLCRTNKMEPFYKSHSNNLK
IK
>Mature_82_residues
MVFKDRLKGLREDRDLTQDQIANILKITRSAVANYENGIREPDISLLVKIADYFNISLDYLLCRTNKMEPFYKSHSNNLK
IK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9620; Mature: 9620

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKDRLKGLREDRDLTQDQIANILKITRSAVANYENGIREPDISLLVKIADYFNISLDY
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
LLCRTNKMEPFYKSHSNNLKIK
HEECCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MVFKDRLKGLREDRDLTQDQIANILKITRSAVANYENGIREPDISLLVKIADYFNISLDY
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
LLCRTNKMEPFYKSHSNNLKIK
HEECCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA