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The map label for this gene is 226949550

Identifier: 226949550

GI number: 226949550

Start: 2557852

End: 2558202

Strand: Direct

Name: 226949550

Synonym: CLM_2486

Alternate gene names: NA

Gene position: 2557852-2558202 (Clockwise)

Preceding gene: 226949549

Following gene: 226949555

Centisome position: 61.56

GC content: 23.08

Gene sequence:

>351_bases
ATGGATTTAGCTCTAAAACTAGGCTTAAATGAAAAGCAAGGACGGTATATAATTAAAGATTATGAAACTAGAGGTTTATA
TCCTCCACCAGAACTATCTATAAAATTAGCTAAAATATTTAATTTAAATACTAAATATTTCTATGATGAATACTATGGAT
TTTTAGATATGGATTATCCTAATATAATAAAAAACTACAGATTAGAAAATAATCTTTCTAAAACTAAATTAGCTAAATTA
TTAAGTACTACATATGAAACTATAATTAGATGGGAAAAAGGTGAAAATATAAGTAGGCAATACTATAAAAAATTAAATAA
ATTAATGCAATTAACAACTAAGGAGCCTTAA

Upstream 100 bases:

>100_bases
ATATATAATTTATCTAAATAAATGTAAGATTAATAATACAACACCTAAATCAACTAGTCAATGGATAAAATTTCATAGAC
TTCAATTAGGTTGGTCACAA

Downstream 100 bases:

>100_bases
TAGGCTCCTATTTTATTGGTGGTGGTAACTTAGTTATACCTGCCCAGTATCCATTTTCATATTTTATATAGTTAAGTGAA
TGGAACCTTTTTAAATTCAT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MDLALKLGLNEKQGRYIIKDYETRGLYPPPELSIKLAKIFNLNTKYFYDEYYGFLDMDYPNIIKNYRLENNLSKTKLAKL
LSTTYETIIRWEKGENISRQYYKKLNKLMQLTTKEP

Sequences:

>Translated_116_residues
MDLALKLGLNEKQGRYIIKDYETRGLYPPPELSIKLAKIFNLNTKYFYDEYYGFLDMDYPNIIKNYRLENNLSKTKLAKL
LSTTYETIIRWEKGENISRQYYKKLNKLMQLTTKEP
>Mature_116_residues
MDLALKLGLNEKQGRYIIKDYETRGLYPPPELSIKLAKIFNLNTKYFYDEYYGFLDMDYPNIIKNYRLENNLSKTKLAKL
LSTTYETIIRWEKGENISRQYYKKLNKLMQLTTKEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13933; Mature: 13933

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLALKLGLNEKQGRYIIKDYETRGLYPPPELSIKLAKIFNLNTKYFYDEYYGFLDMDYP
CCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEHHEECCCCCEEEHHHCCEECCCCH
NIIKNYRLENNLSKTKLAKLLSTTYETIIRWEKGENISRQYYKKLNKLMQLTTKEP
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDLALKLGLNEKQGRYIIKDYETRGLYPPPELSIKLAKIFNLNTKYFYDEYYGFLDMDYP
CCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEHHEECCCCCEEEHHHCCEECCCCH
NIIKNYRLENNLSKTKLAKLLSTTYETIIRWEKGENISRQYYKKLNKLMQLTTKEP
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA