| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is ulaA [H]
Identifier: 226949434
GI number: 226949434
Start: 2440810
End: 2442174
Strand: Reverse
Name: ulaA [H]
Synonym: CLM_2362
Alternate gene names: 226949434
Gene position: 2442174-2440810 (Counterclockwise)
Preceding gene: 226949435
Following gene: 226949433
Centisome position: 58.77
GC content: 34.95
Gene sequence:
>1365_bases ATGTTAGGATTACTTCAATTTTTAAGAGACGTTTTAAAACAACCGGCATTATTAATGGGTATTATGGCATTAGTAGGACT TGTAGCCTTAAAGAAACCTGGACATAAGGTTCTTACAGGAACTTTAAAACCAATATTAGGTTACTTAATGCTTGGTGCCG GTGCAGATTTTATAGTAGCAAACTTAGAACCCTTAGGAGGAATGATCCAAACTGGTTTTAACATAACTGGAGTAGTACCA AATAATGAAGCAATCGTTGCTGTTGCCCAAAAGGTACTAGGGGTAGAAACCATGTCAATTTTAGTTGTTGGACTTTTAAT AAATCTTGTTATAGCAAGGTTTACTAAATACAAATATGTATTTTTAACTGGTCATCATAGTTTCTTTATGGCATGTCTTT TATCAGCAGTTTTAGGAACTTCCGGTATGAAGGGAACTGAACTTATATTATTTGGTGGATTTTTACTTGGAGCATGGAGT GCAATATCACCTGCAATTGGTCAAAAATACACATTAAAGGTTACTGATGGTGATGAAATTGCTATGGGTCACTTTGGAAG CTTAGCATACTATGTTTCAGCTTGGGTTGGTTCAAAAGTAGGCAAGCCTGAAGAAAGCACTGAAAACATTGAAATTCCCG AAAAGTGGGGATTCTTAAGAGATACCACTATTTCTACAGCAATTACAATGATGGTATTTTATATAGTAGCAGCTGTAGCT GCTGGTCCTGAATATGTATCTAAATTATCAGATGGAATGTCACCTATATTATTTGCTATAATGTCATCATTAAAATTTGC AGTTGGTGTTACTATTGTTTACAATGGTGTAAGAATGATTCTTGGAGATCTTATACCAGCATTCCAAGGTATTGCAACAA AAATTATACCAGATGCTATACCAGCAGTTGATTGTGCCGTATTTTTCCCTTATGCACCTACAGCAGTTATAATCGGTTTT GTAAGCTCATTCATAGGTGGAATTATAGGTATGGTTTTACTTGGAGTAGCTGGAGGAGTACTTATAATACCGGGACTTGT ACCTCACTTCTTCTGTGGTTCTACAGCAGGTATATTTGGAAATGCAACAGGAGGAAAAAAGGGAGCTGTAATTGGAAGTT TTGTAAACGGACTTTTGATAACCTTTGCACCGGCATTACTTCTTCCAGTACTTAGTACCCTTGGATTCAAAAACACAACT TTTGGTGATTTTGATTTCGGTGTTCTTGGTATAATAATTGGGAAAACATCAAATCTAGCAGGAAAAACAGGAATAATAAT TATTGCTATGTTGATGTTAGTAGCTCTTATAGTTCCAAACTTTATTAAGACTAAATCAAAAGCATTAAATAATATAGAAG AATAA
Upstream 100 bases:
>100_bases TGTGGTAAGAAGTTATATAAATAAGAAAAAAATCACAGAGGATGTACTTGAAATTATAAAACAAAAGGATGAAGAATTAA AAAAATAGGAGTTGATTAAA
Downstream 100 bases:
>100_bases ATTAATAAAAAGGAGTTGTAAATATATAAAATGATTTCCATAAAGTCTTCATTTTAATATATTTGCACTTCTTTTTTATA TAATAAAACCTATAACTATG
Product: PTS system ascorbate-specific transporter subunit IIC
Products: NA
Alternate protein names: Ascorbate-specific PTS system EIIC component [H]
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MLGLLQFLRDVLKQPALLMGIMALVGLVALKKPGHKVLTGTLKPILGYLMLGAGADFIVANLEPLGGMIQTGFNITGVVP NNEAIVAVAQKVLGVETMSILVVGLLINLVIARFTKYKYVFLTGHHSFFMACLLSAVLGTSGMKGTELILFGGFLLGAWS AISPAIGQKYTLKVTDGDEIAMGHFGSLAYYVSAWVGSKVGKPEESTENIEIPEKWGFLRDTTISTAITMMVFYIVAAVA AGPEYVSKLSDGMSPILFAIMSSLKFAVGVTIVYNGVRMILGDLIPAFQGIATKIIPDAIPAVDCAVFFPYAPTAVIIGF VSSFIGGIIGMVLLGVAGGVLIIPGLVPHFFCGSTAGIFGNATGGKKGAVIGSFVNGLLITFAPALLLPVLSTLGFKNTT FGDFDFGVLGIIIGKTSNLAGKTGIIIIAMLMLVALIVPNFIKTKSKALNNIEE
Sequences:
>Translated_454_residues MLGLLQFLRDVLKQPALLMGIMALVGLVALKKPGHKVLTGTLKPILGYLMLGAGADFIVANLEPLGGMIQTGFNITGVVP NNEAIVAVAQKVLGVETMSILVVGLLINLVIARFTKYKYVFLTGHHSFFMACLLSAVLGTSGMKGTELILFGGFLLGAWS AISPAIGQKYTLKVTDGDEIAMGHFGSLAYYVSAWVGSKVGKPEESTENIEIPEKWGFLRDTTISTAITMMVFYIVAAVA AGPEYVSKLSDGMSPILFAIMSSLKFAVGVTIVYNGVRMILGDLIPAFQGIATKIIPDAIPAVDCAVFFPYAPTAVIIGF VSSFIGGIIGMVLLGVAGGVLIIPGLVPHFFCGSTAGIFGNATGGKKGAVIGSFVNGLLITFAPALLLPVLSTLGFKNTT FGDFDFGVLGIIIGKTSNLAGKTGIIIIAMLMLVALIVPNFIKTKSKALNNIEE >Mature_454_residues MLGLLQFLRDVLKQPALLMGIMALVGLVALKKPGHKVLTGTLKPILGYLMLGAGADFIVANLEPLGGMIQTGFNITGVVP NNEAIVAVAQKVLGVETMSILVVGLLINLVIARFTKYKYVFLTGHHSFFMACLLSAVLGTSGMKGTELILFGGFLLGAWS AISPAIGQKYTLKVTDGDEIAMGHFGSLAYYVSAWVGSKVGKPEESTENIEIPEKWGFLRDTTISTAITMMVFYIVAAVA AGPEYVSKLSDGMSPILFAIMSSLKFAVGVTIVYNGVRMILGDLIPAFQGIATKIIPDAIPAVDCAVFFPYAPTAVIIGF VSSFIGGIIGMVLLGVAGGVLIIPGLVPHFFCGSTAGIFGNATGGKKGAVIGSFVNGLLITFAPALLLPVLSTLGFKNTT FGDFDFGVLGIIIGKTSNLAGKTGIIIIAMLMLVALIVPNFIKTKSKALNNIEE
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3037
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ulaA family [H]
Homologues:
Organism=Escherichia coli, GI87082388, Length=383, Percent_Identity=29.242819843342, Blast_Score=164, Evalue=9e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004703 [H]
Pfam domain/function: PF03611 EIIC-GAT [H]
EC number: NA
Molecular weight: Translated: 47562; Mature: 47562
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLLQFLRDVLKQPALLMGIMALVGLVALKKPGHKVLTGTLKPILGYLMLGAGADFIVA CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE NLEPLGGMIQTGFNITGVVPNNEAIVAVAQKVLGVETMSILVVGLLINLVIARFTKYKYV CCCHHCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE FLTGHHSFFMACLLSAVLGTSGMKGTELILFGGFLLGAWSAISPAIGQKYTLKVTDGDEI EEECCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCHHHCCEEEEEECCCCCE AMGHFGSLAYYVSAWVGSKVGKPEESTENIEIPEKWGFLRDTTISTAITMMVFYIVAAVA EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH AGPEYVSKLSDGMSPILFAIMSSLKFAVGVTIVYNGVRMILGDLIPAFQGIATKIIPDAI CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAVDCAVFFPYAPTAVIIGFVSSFIGGIIGMVLLGVAGGVLIIPGLVPHFFCGSTAGIFG CHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCC NATGGKKGAVIGSFVNGLLITFAPALLLPVLSTLGFKNTTFGDFDFGVLGIIIGKTSNLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEECCCCCC GKTGIIIIAMLMLVALIVPNFIKTKSKALNNIEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLGLLQFLRDVLKQPALLMGIMALVGLVALKKPGHKVLTGTLKPILGYLMLGAGADFIVA CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE NLEPLGGMIQTGFNITGVVPNNEAIVAVAQKVLGVETMSILVVGLLINLVIARFTKYKYV CCCHHCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE FLTGHHSFFMACLLSAVLGTSGMKGTELILFGGFLLGAWSAISPAIGQKYTLKVTDGDEI EEECCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCHHHCCEEEEEECCCCCE AMGHFGSLAYYVSAWVGSKVGKPEESTENIEIPEKWGFLRDTTISTAITMMVFYIVAAVA EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH AGPEYVSKLSDGMSPILFAIMSSLKFAVGVTIVYNGVRMILGDLIPAFQGIATKIIPDAI CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAVDCAVFFPYAPTAVIIGFVSSFIGGIIGMVLLGVAGGVLIIPGLVPHFFCGSTAGIFG CHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCC NATGGKKGAVIGSFVNGLLITFAPALLLPVLSTLGFKNTTFGDFDFGVLGIIIGKTSNLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEECCCCCC GKTGIIIIAMLMLVALIVPNFIKTKSKALNNIEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]