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The map label for this gene is yycB [H]

Identifier: 226949410

GI number: 226949410

Start: 2409800

End: 2411044

Strand: Reverse

Name: yycB [H]

Synonym: CLM_2335

Alternate gene names: 226949410

Gene position: 2411044-2409800 (Counterclockwise)

Preceding gene: 226949411

Following gene: 226949408

Centisome position: 58.02

GC content: 34.46

Gene sequence:

>1245_bases
ATGATGTCACTAAATAAATCAGATAAAAAACAAAATAATATGGATTTTAAAGTACGTAAATCAGCATCGTTGATGCTTAT
TATAGGTATTATATTTATTGCGGCCAATTTACGAGCACCTTTAACTTCCGTTGGACCTTTAGTAAAATTTATTAGAGACA
ATTTACATATATCAAACACGCTAGCTGGTATGATTACTACACTACCATTATTCGCTTTTGCAATTTTTTCACCGGTTGCA
CCTAGATTGGGACGTAAGTTTGGCGTTGAACTAGTATTACTATTGTCAGTTATATTTCTTACTGTTGGTATTATTCTACG
TTCTTTGTCAGGGGTTGCTGGTTTATTTATTGGTACTGCTATAATAGGTTTAGCTATTTCTGTCGCTAACGTATTAATCC
CCAGTCTTATTAAACGAGATTTCCCAGAAAAAATTGGTGTTATGACAGGTGTTTATTCAATATCTATGAATACATTTGGA
GCAATAGCTTCTGGTATAAGTGTTCCAATAGCTACTAGATTAGGATTAAAATGGTCTGGAGCATTAGGAATATGGGGAAT
TTTAAGTTTTATATCAATTATACTTTGGTTACCTCAAGTAAAACGCAATGATGGAGAAGCATCTAAGGGTCATAAAGCAG
ATAGTAGCAATGTGAGCTTATGGAAATCATCTTTAGCATGGCAAGTAACTTTGTTTATGGGACTGCAATCTTTAGTGTTT
TATTCTATGGTAGCATGGATGCCAGAGATTCTAATGCAGAAAGGTATGAGTTCCAATAAAGCTGGTTGGATGCTTTCTCT
TATGCAATTAGCGCTGATTCCTTTCACTTTTATTGTTTCAGTTCTTGCTGGACGTAGATCTAATCAACGATCTTTAGTTA
TAAGTGGGTGTTTATTTATATTAATTGGAATCTTAGGATTACTTTATGGGAGTTCACAATTTGTGTTTTTATGGATTATT
ATATTAGGAATCGGTGGAGGTTTTGCATTTAGCTTATCAATGATGTTTTTTAGCTTACGTACAGAAGATTCAAATGAAGC
TGCTCAACTGTCTGGAATGGCACAGTCATTGGGATATCTGCTTGCTGCCTTTGGACCAATACTATTCGGATTTCTCCATG
ATGCAACTAATAGCTGGAAAGTTCCGCTTCAAACACTGATTGGTATTACAGTTTTATTATTTATATTTGGTCTAGGTGCA
TCTCGTAATAGGTATGTAGGTTCATCCTTAAAAGTGGTAAGGTAG

Upstream 100 bases:

>100_bases
GAGAGTGTTAATGAATATTTGAACAAGGCAAAAGAAGCTCTGTATACTATGATAAATTAATAAAAAGGAAAAATATACGA
AAGACTAGGAGGAAACTCAT

Downstream 100 bases:

>100_bases
ATGAAATCTATGTAAAATAAAAACAAAACTAACCATCATTATCACAGTTATAATGATGGTTAGTTTTGATAATTTTGAGT
TATTTTGATTTTGAACCTAT

Product: inner membrane transport protein YeaN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MMSLNKSDKKQNNMDFKVRKSASLMLIIGIIFIAANLRAPLTSVGPLVKFIRDNLHISNTLAGMITTLPLFAFAIFSPVA
PRLGRKFGVELVLLLSVIFLTVGIILRSLSGVAGLFIGTAIIGLAISVANVLIPSLIKRDFPEKIGVMTGVYSISMNTFG
AIASGISVPIATRLGLKWSGALGIWGILSFISIILWLPQVKRNDGEASKGHKADSSNVSLWKSSLAWQVTLFMGLQSLVF
YSMVAWMPEILMQKGMSSNKAGWMLSLMQLALIPFTFIVSVLAGRRSNQRSLVISGCLFILIGILGLLYGSSQFVFLWII
ILGIGGGFAFSLSMMFFSLRTEDSNEAAQLSGMAQSLGYLLAAFGPILFGFLHDATNSWKVPLQTLIGITVLLFIFGLGA
SRNRYVGSSLKVVR

Sequences:

>Translated_414_residues
MMSLNKSDKKQNNMDFKVRKSASLMLIIGIIFIAANLRAPLTSVGPLVKFIRDNLHISNTLAGMITTLPLFAFAIFSPVA
PRLGRKFGVELVLLLSVIFLTVGIILRSLSGVAGLFIGTAIIGLAISVANVLIPSLIKRDFPEKIGVMTGVYSISMNTFG
AIASGISVPIATRLGLKWSGALGIWGILSFISIILWLPQVKRNDGEASKGHKADSSNVSLWKSSLAWQVTLFMGLQSLVF
YSMVAWMPEILMQKGMSSNKAGWMLSLMQLALIPFTFIVSVLAGRRSNQRSLVISGCLFILIGILGLLYGSSQFVFLWII
ILGIGGGFAFSLSMMFFSLRTEDSNEAAQLSGMAQSLGYLLAAFGPILFGFLHDATNSWKVPLQTLIGITVLLFIFGLGA
SRNRYVGSSLKVVR
>Mature_414_residues
MMSLNKSDKKQNNMDFKVRKSASLMLIIGIIFIAANLRAPLTSVGPLVKFIRDNLHISNTLAGMITTLPLFAFAIFSPVA
PRLGRKFGVELVLLLSVIFLTVGIILRSLSGVAGLFIGTAIIGLAISVANVLIPSLIKRDFPEKIGVMTGVYSISMNTFG
AIASGISVPIATRLGLKWSGALGIWGILSFISIILWLPQVKRNDGEASKGHKADSSNVSLWKSSLAWQVTLFMGLQSLVF
YSMVAWMPEILMQKGMSSNKAGWMLSLMQLALIPFTFIVSVLAGRRSNQRSLVISGCLFILIGILGLLYGSSQFVFLWII
ILGIGGGFAFSLSMMFFSLRTEDSNEAAQLSGMAQSLGYLLAAFGPILFGFLHDATNSWKVPLQTLIGITVLLFIFGLGA
SRNRYVGSSLKVVR

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=383, Percent_Identity=39.1644908616188, Blast_Score=253, Evalue=1e-68,
Organism=Escherichia coli, GI1786536, Length=355, Percent_Identity=24.7887323943662, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44813; Mature: 44813

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSLNKSDKKQNNMDFKVRKSASLMLIIGIIFIAANLRAPLTSVGPLVKFIRDNLHISNT
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH
LAGMITTLPLFAFAIFSPVAPRLGRKFGVELVLLLSVIFLTVGIILRSLSGVAGLFIGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIGLAISVANVLIPSLIKRDFPEKIGVMTGVYSISMNTFGAIASGISVPIATRLGLKWSG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
ALGIWGILSFISIILWLPQVKRNDGEASKGHKADSSNVSLWKSSLAWQVTLFMGLQSLVF
CHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YSMVAWMPEILMQKGMSSNKAGWMLSLMQLALIPFTFIVSVLAGRRSNQRSLVISGCLFI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LIGILGLLYGSSQFVFLWIIILGIGGGFAFSLSMMFFSLRTEDSNEAAQLSGMAQSLGYL
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LAAFGPILFGFLHDATNSWKVPLQTLIGITVLLFIFGLGASRNRYVGSSLKVVR
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSLNKSDKKQNNMDFKVRKSASLMLIIGIIFIAANLRAPLTSVGPLVKFIRDNLHISNT
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH
LAGMITTLPLFAFAIFSPVAPRLGRKFGVELVLLLSVIFLTVGIILRSLSGVAGLFIGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIGLAISVANVLIPSLIKRDFPEKIGVMTGVYSISMNTFGAIASGISVPIATRLGLKWSG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
ALGIWGILSFISIILWLPQVKRNDGEASKGHKADSSNVSLWKSSLAWQVTLFMGLQSLVF
CHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YSMVAWMPEILMQKGMSSNKAGWMLSLMQLALIPFTFIVSVLAGRRSNQRSLVISGCLFI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LIGILGLLYGSSQFVFLWIIILGIGGGFAFSLSMMFFSLRTEDSNEAAQLSGMAQSLGYL
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LAAFGPILFGFLHDATNSWKVPLQTLIGITVLLFIFGLGASRNRYVGSSLKVVR
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]