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The map label for this gene is pduA [H]

Identifier: 226949404

GI number: 226949404

Start: 2403331

End: 2403627

Strand: Reverse

Name: pduA [H]

Synonym: CLM_2329

Alternate gene names: 226949404

Gene position: 2403627-2403331 (Counterclockwise)

Preceding gene: 226949405

Following gene: 226949403

Centisome position: 57.85

GC content: 38.72

Gene sequence:

>297_bases
ATGAGATATTATGGAGATGAGGCTTTAGGCCTTGTGGAAACAATAGGATTAGTTCCTGCACTTGAGGCTGCAGACAAAAT
GCTTAAGGCGGCTAATGTTGAATTAATTTCTTATGAAAATATTGGTTCAACCCTTGTAACAATTATGGTAAAAGGGGATG
TTGGTGCAGTAAAATCTGCTGTAGAAGCAGGTGCTGAAGCAGCTAGAGCTATCGGTAAATTAACAGCACACAATGTTATG
CCACGTCCTATTAGAGAAGTTGGAGATATTGTTTCAGTACACGATATCGATTCATAA

Upstream 100 bases:

>100_bases
GAATGCATGAAAACCTACACAGAATATATAGAAGAGTTAATAATAGAAGTTATAGTTAATAAAAAGTATATTGGGCTAAA
TTAGGAAGGAGGAATTAAAA

Downstream 100 bases:

>100_bases
AATAGAAAGGAAATGATATACATATGGCAAGATATGAAGCTTTAGGATTAATCGAAACTTTTGGTCTGGTTTTTGCTCTA
GAAGCAGCAGACGCTATGTG

Product: microcompartments family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MRYYGDEALGLVETIGLVPALEAADKMLKAANVELISYENIGSTLVTIMVKGDVGAVKSAVEAGAEAARAIGKLTAHNVM
PRPIREVGDIVSVHDIDS

Sequences:

>Translated_98_residues
MRYYGDEALGLVETIGLVPALEAADKMLKAANVELISYENIGSTLVTIMVKGDVGAVKSAVEAGAEAARAIGKLTAHNVM
PRPIREVGDIVSVHDIDS
>Mature_98_residues
MRYYGDEALGLVETIGLVPALEAADKMLKAANVELISYENIGSTLVTIMVKGDVGAVKSAVEAGAEAARAIGKLTAHNVM
PRPIREVGDIVSVHDIDS

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=77, Percent_Identity=54.5454545454545, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 10278; Mature: 10278

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYYGDEALGLVETIGLVPALEAADKMLKAANVELISYENIGSTLVTIMVKGDVGAVKSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCHHHHHHH
VEAGAEAARAIGKLTAHNVMPRPIREVGDIVSVHDIDS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCC
>Mature Secondary Structure
MRYYGDEALGLVETIGLVPALEAADKMLKAANVELISYENIGSTLVTIMVKGDVGAVKSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCHHHHHHH
VEAGAEAARAIGKLTAHNVMPRPIREVGDIVSVHDIDS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]