Click here to switch to the map view.

The map label for this gene is 226949395

Identifier: 226949395

GI number: 226949395

Start: 2394983

End: 2395285

Strand: Reverse

Name: 226949395

Synonym: CLM_2320

Alternate gene names: NA

Gene position: 2395285-2394983 (Counterclockwise)

Preceding gene: 226949396

Following gene: 226949394

Centisome position: 57.64

GC content: 34.98

Gene sequence:

>303_bases
GTGGATTTTAGAATTATAAAATCACCTTCTAGTAGCACTAAAGATATTCTTAGAAGACGAATGGGTGGAAATTGTAAAAC
GGATTTAGAAAGTGCTGATGCAATAGGACTTGTCCAAGGTAAACTTATCGATATGATTTATGCCGCAGATATTGCTGAGA
AAGCTGTTGGAGTTACCGTTGAAGATATTAGAGGTACATGTCCTCAGCACATGGTTTTACTTGGTATTTTTGGTGACACA
TCATCAGTTGAAGCCGCATTAAATGAGATTAAATTAAAAATGAAAGAGGTAAAAGCAATATGA

Upstream 100 bases:

>100_bases
GTACACAAGATATTATAGAATAAGACACATGAAAATAAATATACTGCCATCTTTGACTTGTTATTTATTTTCATGTGCCT
AATAAGGAGAGTGTTTAAAA

Downstream 100 bases:

>100_bases
TAGCAGCAAGACTTATTGATAATGTATGGGCCACTAGAAAAGCAGAATCCCTTAGCGGACTTAAATTTATGCTTGCTGAG
GAAATTGGCGGGATAGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Microcompartment Shell Protein

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MDFRIIKSPSSSTKDILRRRMGGNCKTDLESADAIGLVQGKLIDMIYAADIAEKAVGVTVEDIRGTCPQHMVLLGIFGDT
SSVEAALNEIKLKMKEVKAI

Sequences:

>Translated_100_residues
MDFRIIKSPSSSTKDILRRRMGGNCKTDLESADAIGLVQGKLIDMIYAADIAEKAVGVTVEDIRGTCPQHMVLLGIFGDT
SSVEAALNEIKLKMKEVKAI
>Mature_100_residues
MDFRIIKSPSSSTKDILRRRMGGNCKTDLESADAIGLVQGKLIDMIYAADIAEKAVGVTVEDIRGTCPQHMVLLGIFGDT
SSVEAALNEIKLKMKEVKAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10839; Mature: 10839

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRIIKSPSSSTKDILRRRMGGNCKTDLESADAIGLVQGKLIDMIYAADIAEKAVGVTV
CCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
EDIRGTCPQHMVLLGIFGDTSSVEAALNEIKLKMKEVKAI
HHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFRIIKSPSSSTKDILRRRMGGNCKTDLESADAIGLVQGKLIDMIYAADIAEKAVGVTV
CCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
EDIRGTCPQHMVLLGIFGDTSSVEAALNEIKLKMKEVKAI
HHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA