| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226949386
Identifier: 226949386
GI number: 226949386
Start: 2384727
End: 2387504
Strand: Reverse
Name: 226949386
Synonym: CLM_2311
Alternate gene names: NA
Gene position: 2387504-2384727 (Counterclockwise)
Preceding gene: 226949387
Following gene: 226949385
Centisome position: 57.46
GC content: 28.69
Gene sequence:
>2778_bases ATGAAAGGTTTTATGAAATTTTTAATGCTTCAAGCATTATTCATTTGTGCTATATTTGGAACTGCAACAAATGTTTATGC TGATGAAGTAAAGCAAAAAGAACTTTATACCTTAGAAAATCCTACTTGGTTTAAAAAAACTGGTTTTTCTAAAGGACTTG GTCATGATAAGCAAGATTTAGGTATAATCTTACCTGCAAATGTACAGCTAACAATTAGACAGGTAAATCCTAATTTTAAA GGGAATTTAACTGTAAGATTATTAAATGATAATAATCAACATGAGACATCTAGAACATTTAATCAAACATCAATTACTAT ATCAACTCCATATAGTTCAGTTCCATTTGTGGATACGGTTTATGGTGGTAGTGAAAAACCTAAAATTGAATATAGGGTAA CTAGCAGCATGCAAACTTTGCCTATTTATAAAAAGGGACAAAATGAACAATCATTTTTTAATGAGTGGGACAAAGCAGCA GCTCCTTTTGCTTTAGTAAAAGATGACTATTTTCAATTATTAGTTCCACAAAAAGATAAAGCTTACATGAAAAATATGAA AGATTTTTCTTCTATTGATCAATTAATTCTTTATTATCGTGAAATATTTGAGTATTACAATAAGCTAGCTGGAATCAGTT TTAATACAAATGTTCAAACTGATAAAAATGTTCCTAATAAATATTTTATAAAAGCTGACAAGAGTGGTCCTGGTGGTGGT TATTATGGTGGCAATCATACTGCAGAAACTTCAGATTCAGTAGCTAGCTTTTGGTTAACAAAAGGTTGGGGAGCCTTACA TGAAATTGGTCATGGATATCAAGACGATTTCACTAGAGGGGAAGTTTGGAATAATATATATGCTCATAGTCTTCAGAAAA AAGATTCAGATGTAGATATTTTTAAAAATGGATGGTTATATGATTATGGCAAAAAAGATGCCGTTGATTATAATGTAAAT AAACTTTGGCATCAAGATAAAGCAGCTTTTAATACTTGGGGATTAAGAGAGCAGCTATATGGATATGTACTTATGAAGGA TAAAGCTGGAGATGATAGTTTTACTCATTTTAATCAAGAATATCGTAAATTAGCAAATACTTCTGGTTTTAATACATCCG ACTATAAACAATTTGATTTAATAAGTAAATGCTATGGTGAAATAAGCAAACTAGATTTTACACCAGTTATAGAATCCTTT GGTGGAACTATGACAGATTGGCAAAAGGAAGAAAATAGATATAAAAATTACAAACCTGTTGCACCATTAAATGAGGTTGT TCCTGTTAGTCAGGTTTCTCAAATACAACAATCATTAAAATTAGAAACTCCATTATCTTTAGTAACTACAGAGGATTTAG CTGCTACTGATTTAACAGGGGATGTAACTTTAAATTTTAAAATTGATGATTTTAATCAAATTAAAAATCAAACCCTTTAT ATAATGAATGGAGAAAAAGAAGTTAAAAAGGTTGTTATTACAAATCCAACTCTTTCTCTAGGTCAGTTGCCAGTAGGTAT TTATACTATTTATAGTACAAATAGTTCTAATAAATTATATACACTTGATAACCATTATTTAAAAGTTAAAGAAGCTAATA ATAATATAACTTTAAATTATAAATTACGTACAAAAAGTACTTTAGTAAATCAAGAAATAGATTTTTTAGGAATATCCGAT AATTTATTTGCTACAGCTACTGTGGATTTACAAAATGAAAAGCTAAATGTGAAAGTTCTTAATAAGACACCACATGATTA TTTCCCAAATGAACAGTATGCTAAAATTGAGATCTTAGATCAAAATAATAATGTTACTTATACAAAAGTAATTACTGGTA CAAATGCAGCATTAGAAAATAGTAGTCAAACTTTAAAGAAAGGATATAAGATTAGGCTATATCACCGTGAACCATCACGT TTAAAAATTAGAGATAACAAAACTGTTCTTACTAATAATCAGACTAATACATTGATTGTTACTAGCCAAGGACTTAAAAA TGAAAACTTAAACCAAAACTTAAATCAAGAATTGGCTGGAAGAATTGATAGTTTTGCAGCGAAAATTAACGCTGAAAATC TTATGGCTAAAAGTGATTGTGCAGAGTCTAAGATAGAGTTGAAACTAGCAATAGATGCCTTAACAGAACCTTTAAGAAGT GAAATGTTAACAAAATACAAGGACCTTTTACCAAATTCAACAATAAATAAAGAAAATCCTTATCTAGGTAAAAAATTTAA TGCTACTTTTAAAGGCTTAGGAGATTGGATTTTTGCAGAGTTAAATTTAGATTTAACTTCTAAACAAGCTAAAATAGATA TAAAAAAAGGTGAACCTCATGTTTATTTTTCTGATACTTATGCATCAATTTTAATAAGAAGTGCTGAAGGAAATACTGTT TATACAAAAGATTTTATTGGCGATAAGGAAAATGAAACATTAATTAAAAATATTGATATTAAACCTGGATACTATATTAC AATAAAACATCAAGAACCAGACAATAGATTATTAATTACAAATACAGAAAATGAATTAGAACTAGAAAAAGGCAATAGTA TAACTTACAAAATTACTGATACTGGACTAGTAAAATCATCTGAAGATGAAATTAATAAATCACCTGAAAATGAATGGAAC CCTAATAAAAGCTATAACGCAGGAGATAAGGTTAGCTATAAAGAAAAGACTTATAAAGCAAAATGGTGGTCACAAGGCTT TGCTCCAGATACAAAAGTACAAAATCCATGGGAGACACCTTGGGAATTAATAAGCTAG
Upstream 100 bases:
>100_bases CTGTTAATAAGTATTAAAAAATATATTGTATATTTATTGTCATATTTTAAAATTTATCTGATTTAACAGACTTAAGTTAC AATAAAAGGGGGACAAGCCA
Downstream 100 bases:
>100_bases AATTAGTATATTAATAAAGTTAAAACAAGAATAAAACTCATTCATATAATTATTATAAAATATAACCAATAATGTTAAAG AGCAGCCTTTAGGATGCTCT
Product: viral enhancin protein
Products: NA
Alternate protein names: Fibronectin Type III Domain-Containing Protein; Enhancin Family Protein; Enhancing Factor; S-Layer Domain Protein; S-Layer Domain-Containing Protein; Surface Associated Protein With Similarity Proteases; Viral Enhancin Protein; Metallprotease Enhancin Family
Number of amino acids: Translated: 925; Mature: 925
Protein sequence:
>925_residues MKGFMKFLMLQALFICAIFGTATNVYADEVKQKELYTLENPTWFKKTGFSKGLGHDKQDLGIILPANVQLTIRQVNPNFK GNLTVRLLNDNNQHETSRTFNQTSITISTPYSSVPFVDTVYGGSEKPKIEYRVTSSMQTLPIYKKGQNEQSFFNEWDKAA APFALVKDDYFQLLVPQKDKAYMKNMKDFSSIDQLILYYREIFEYYNKLAGISFNTNVQTDKNVPNKYFIKADKSGPGGG YYGGNHTAETSDSVASFWLTKGWGALHEIGHGYQDDFTRGEVWNNIYAHSLQKKDSDVDIFKNGWLYDYGKKDAVDYNVN KLWHQDKAAFNTWGLREQLYGYVLMKDKAGDDSFTHFNQEYRKLANTSGFNTSDYKQFDLISKCYGEISKLDFTPVIESF GGTMTDWQKEENRYKNYKPVAPLNEVVPVSQVSQIQQSLKLETPLSLVTTEDLAATDLTGDVTLNFKIDDFNQIKNQTLY IMNGEKEVKKVVITNPTLSLGQLPVGIYTIYSTNSSNKLYTLDNHYLKVKEANNNITLNYKLRTKSTLVNQEIDFLGISD NLFATATVDLQNEKLNVKVLNKTPHDYFPNEQYAKIEILDQNNNVTYTKVITGTNAALENSSQTLKKGYKIRLYHREPSR LKIRDNKTVLTNNQTNTLIVTSQGLKNENLNQNLNQELAGRIDSFAAKINAENLMAKSDCAESKIELKLAIDALTEPLRS EMLTKYKDLLPNSTINKENPYLGKKFNATFKGLGDWIFAELNLDLTSKQAKIDIKKGEPHVYFSDTYASILIRSAEGNTV YTKDFIGDKENETLIKNIDIKPGYYITIKHQEPDNRLLITNTENELELEKGNSITYKITDTGLVKSSEDEINKSPENEWN PNKSYNAGDKVSYKEKTYKAKWWSQGFAPDTKVQNPWETPWELIS
Sequences:
>Translated_925_residues MKGFMKFLMLQALFICAIFGTATNVYADEVKQKELYTLENPTWFKKTGFSKGLGHDKQDLGIILPANVQLTIRQVNPNFK GNLTVRLLNDNNQHETSRTFNQTSITISTPYSSVPFVDTVYGGSEKPKIEYRVTSSMQTLPIYKKGQNEQSFFNEWDKAA APFALVKDDYFQLLVPQKDKAYMKNMKDFSSIDQLILYYREIFEYYNKLAGISFNTNVQTDKNVPNKYFIKADKSGPGGG YYGGNHTAETSDSVASFWLTKGWGALHEIGHGYQDDFTRGEVWNNIYAHSLQKKDSDVDIFKNGWLYDYGKKDAVDYNVN KLWHQDKAAFNTWGLREQLYGYVLMKDKAGDDSFTHFNQEYRKLANTSGFNTSDYKQFDLISKCYGEISKLDFTPVIESF GGTMTDWQKEENRYKNYKPVAPLNEVVPVSQVSQIQQSLKLETPLSLVTTEDLAATDLTGDVTLNFKIDDFNQIKNQTLY IMNGEKEVKKVVITNPTLSLGQLPVGIYTIYSTNSSNKLYTLDNHYLKVKEANNNITLNYKLRTKSTLVNQEIDFLGISD NLFATATVDLQNEKLNVKVLNKTPHDYFPNEQYAKIEILDQNNNVTYTKVITGTNAALENSSQTLKKGYKIRLYHREPSR LKIRDNKTVLTNNQTNTLIVTSQGLKNENLNQNLNQELAGRIDSFAAKINAENLMAKSDCAESKIELKLAIDALTEPLRS EMLTKYKDLLPNSTINKENPYLGKKFNATFKGLGDWIFAELNLDLTSKQAKIDIKKGEPHVYFSDTYASILIRSAEGNTV YTKDFIGDKENETLIKNIDIKPGYYITIKHQEPDNRLLITNTENELELEKGNSITYKITDTGLVKSSEDEINKSPENEWN PNKSYNAGDKVSYKEKTYKAKWWSQGFAPDTKVQNPWETPWELIS >Mature_925_residues MKGFMKFLMLQALFICAIFGTATNVYADEVKQKELYTLENPTWFKKTGFSKGLGHDKQDLGIILPANVQLTIRQVNPNFK GNLTVRLLNDNNQHETSRTFNQTSITISTPYSSVPFVDTVYGGSEKPKIEYRVTSSMQTLPIYKKGQNEQSFFNEWDKAA APFALVKDDYFQLLVPQKDKAYMKNMKDFSSIDQLILYYREIFEYYNKLAGISFNTNVQTDKNVPNKYFIKADKSGPGGG YYGGNHTAETSDSVASFWLTKGWGALHEIGHGYQDDFTRGEVWNNIYAHSLQKKDSDVDIFKNGWLYDYGKKDAVDYNVN KLWHQDKAAFNTWGLREQLYGYVLMKDKAGDDSFTHFNQEYRKLANTSGFNTSDYKQFDLISKCYGEISKLDFTPVIESF GGTMTDWQKEENRYKNYKPVAPLNEVVPVSQVSQIQQSLKLETPLSLVTTEDLAATDLTGDVTLNFKIDDFNQIKNQTLY IMNGEKEVKKVVITNPTLSLGQLPVGIYTIYSTNSSNKLYTLDNHYLKVKEANNNITLNYKLRTKSTLVNQEIDFLGISD NLFATATVDLQNEKLNVKVLNKTPHDYFPNEQYAKIEILDQNNNVTYTKVITGTNAALENSSQTLKKGYKIRLYHREPSR LKIRDNKTVLTNNQTNTLIVTSQGLKNENLNQNLNQELAGRIDSFAAKINAENLMAKSDCAESKIELKLAIDALTEPLRS EMLTKYKDLLPNSTINKENPYLGKKFNATFKGLGDWIFAELNLDLTSKQAKIDIKKGEPHVYFSDTYASILIRSAEGNTV YTKDFIGDKENETLIKNIDIKPGYYITIKHQEPDNRLLITNTENELELEKGNSITYKITDTGLVKSSEDEINKSPENEWN PNKSYNAGDKVSYKEKTYKAKWWSQGFAPDTKVQNPWETPWELIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105619; Mature: 105619
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFMKFLMLQALFICAIFGTATNVYADEVKQKELYTLENPTWFKKTGFSKGLGHDKQDL CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCEEHHCCCCCCCCCCCCCC GIILPANVQLTIRQVNPNFKGNLTVRLLNDNNQHETSRTFNQTSITISTPYSSVPFVDTV CEEECCCEEEEEEEECCCCCCCEEEEEECCCCCCHHHCCCCEEEEEEECCCCCCCCEEEE YGGSEKPKIEYRVTSSMQTLPIYKKGQNEQSFFNEWDKAAAPFALVKDDYFQLLVPQKDK CCCCCCCEEEEEECCCCEECCCEECCCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCHH AYMKNMKDFSSIDQLILYYREIFEYYNKLAGISFNTNVQTDKNVPNKYFIKADKSGPGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEECCCCCCCC YYGGNHTAETSDSVASFWLTKGWGALHEIGHGYQDDFTRGEVWNNIYAHSLQKKDSDVDI CCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE FKNGWLYDYGKKDAVDYNVNKLWHQDKAAFNTWGLREQLYGYVLMKDKAGDDSFTHFNQE EECCCEEECCCCCCCCCCHHHHHHHCHHHHHHCCCHHHHCEEEEEECCCCCCHHHHHHHH YRKLANTSGFNTSDYKQFDLISKCYGEISKLDFTPVIESFGGTMTDWQKEENRYKNYKPV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCCCCC APLNEVVPVSQVSQIQQSLKLETPLSLVTTEDLAATDLTGDVTLNFKIDDFNQIKNQTLY CCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCEEEEEEECCHHHCCCCEEE IMNGEKEVKKVVITNPTLSLGQLPVGIYTIYSTNSSNKLYTLDNHYLKVKEANNNITLNY EECCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCEEEEEECCCEEEEEE KLRTKSTLVNQEIDFLGISDNLFATATVDLQNEKLNVKVLNKTPHDYFPNEQYAKIEILD EEECCHHHHCCCCEEEEECCCEEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEE QNNNVTYTKVITGTNAALENSSQTLKKGYKIRLYHREPSRLKIRDNKTVLTNNQTNTLIV CCCCEEEEEEEECCCHHHCCCHHHHHCCCEEEEEECCCCEEEEECCCEEEECCCCCEEEE TSQGLKNENLNQNLNQELAGRIDSFAAKINAENLMAKSDCAESKIELKLAIDALTEPLRS EECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHEECCCCCCCEEEEEEEHHHHHHHHHH EMLTKYKDLLPNSTINKENPYLGKKFNATFKGLGDWIFAELNLDLTSKQAKIDIKKGEPH HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECEEECCEEEEEEECCCCE VYFSDTYASILIRSAEGNTVYTKDFIGDKENETLIKNIDIKPGYYITIKHQEPDNRLLIT EEECCCEEEEEEECCCCCEEEEHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEE NTENELELEKGNSITYKITDTGLVKSSEDEINKSPENEWNPNKSYNAGDKVSYKEKTYKA CCCCCEEEECCCEEEEEEECCCCEECCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEE KWWSQGFAPDTKVQNPWETPWELIS HHHCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MKGFMKFLMLQALFICAIFGTATNVYADEVKQKELYTLENPTWFKKTGFSKGLGHDKQDL CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCEEHHCCCCCCCCCCCCCC GIILPANVQLTIRQVNPNFKGNLTVRLLNDNNQHETSRTFNQTSITISTPYSSVPFVDTV CEEECCCEEEEEEEECCCCCCCEEEEEECCCCCCHHHCCCCEEEEEEECCCCCCCCEEEE YGGSEKPKIEYRVTSSMQTLPIYKKGQNEQSFFNEWDKAAAPFALVKDDYFQLLVPQKDK CCCCCCCEEEEEECCCCEECCCEECCCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCHH AYMKNMKDFSSIDQLILYYREIFEYYNKLAGISFNTNVQTDKNVPNKYFIKADKSGPGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEECCCCCCCC YYGGNHTAETSDSVASFWLTKGWGALHEIGHGYQDDFTRGEVWNNIYAHSLQKKDSDVDI CCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE FKNGWLYDYGKKDAVDYNVNKLWHQDKAAFNTWGLREQLYGYVLMKDKAGDDSFTHFNQE EECCCEEECCCCCCCCCCHHHHHHHCHHHHHHCCCHHHHCEEEEEECCCCCCHHHHHHHH YRKLANTSGFNTSDYKQFDLISKCYGEISKLDFTPVIESFGGTMTDWQKEENRYKNYKPV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCCCCC APLNEVVPVSQVSQIQQSLKLETPLSLVTTEDLAATDLTGDVTLNFKIDDFNQIKNQTLY CCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCEEEEEEECCHHHCCCCEEE IMNGEKEVKKVVITNPTLSLGQLPVGIYTIYSTNSSNKLYTLDNHYLKVKEANNNITLNY EECCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEECCCEEEEEECCCEEEEEE KLRTKSTLVNQEIDFLGISDNLFATATVDLQNEKLNVKVLNKTPHDYFPNEQYAKIEILD EEECCHHHHCCCCEEEEECCCEEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEE QNNNVTYTKVITGTNAALENSSQTLKKGYKIRLYHREPSRLKIRDNKTVLTNNQTNTLIV CCCCEEEEEEEECCCHHHCCCHHHHHCCCEEEEEECCCCEEEEECCCEEEECCCCCEEEE TSQGLKNENLNQNLNQELAGRIDSFAAKINAENLMAKSDCAESKIELKLAIDALTEPLRS EECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHEECCCCCCCEEEEEEEHHHHHHHHHH EMLTKYKDLLPNSTINKENPYLGKKFNATFKGLGDWIFAELNLDLTSKQAKIDIKKGEPH HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECEEECCEEEEEEECCCCE VYFSDTYASILIRSAEGNTVYTKDFIGDKENETLIKNIDIKPGYYITIKHQEPDNRLLIT EEECCCEEEEEEECCCCCEEEEHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEE NTENELELEKGNSITYKITDTGLVKSSEDEINKSPENEWNPNKSYNAGDKVSYKEKTYKA CCCCCEEEECCCEEEEEEECCCCEECCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEE KWWSQGFAPDTKVQNPWETPWELIS HHHCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA