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The map label for this gene is yfbE [C]

Identifier: 226949346

GI number: 226949346

Start: 2339377

End: 2340516

Strand: Reverse

Name: yfbE [C]

Synonym: CLM_2269

Alternate gene names: 226949346

Gene position: 2340516-2339377 (Counterclockwise)

Preceding gene: 226949347

Following gene: 226949345

Centisome position: 56.33

GC content: 37.63

Gene sequence:

>1140_bases
ATGACAGCAGAACGTTTTACAAAGCCTTTCTATATAACACAACCTTTGCTGCCTGATATAAATCAAATGAACGAGATGAT
AAAAGAAATATGGGAAAGCAATCAGTTGAGCAATAATGGGAATATGGTAAAACAACTTGAAAGAGATCTGTCAAATTTTC
TCAATACGGATTACCTTTCAGTTTTTTCAAATGGAACGACTGCATTACAGTTAGCATGTAAGGTTTTAAGATTGTCAGGG
GAAGTGATAACCACTCCATTTACGTTTGCAGCAACAGTCCATTCGCTGCCTTGGAACAATATCAAACCGATCTTTTGTGA
CATTGAGGAAGATACATTCAATATAAATCCGGATCTTATCGAGTCATTAATAACACAAGATACTACTGCGATAATGCCTG
TTCATGTTTTCGGAACCCCTTGCAATGTTGAGAAAATCCAACGGATTGCAGACAAACATGGGCTTAAGGTGTTGTATGAC
GCTGCACATGCCTTTGGGGTGGAAATTGACGGTAAGCCTATTTCATCTTTTGGCGATATATCAATGTTCAGTTTTCATGC
GACAAAAATATATCATACAATAGAGGGGGGAGCATTAACCTTCAAAGATGCATACTCAAAGGAAAGAGCAGATTCCCTAA
GGAATTTTGGGATACAAGGCATCGATAATATAACTGAACCCGGTACCAATGGGAAGCTCAACGAAGTACAGGCAGCCGTA
GGTATATTACTGCTCAAGATGGTTGAGGATGAAATTGAAAAAAGGAAAGAAATTACAAACCTTTATCGCAAATTGCTAGA
AAATATACCCGGAATTACCACCAGCAAGGACATTGAGGGTGTCAAACATAATTACCCTTATTTCGTTATAAGAGTGGATA
AAAAAGAATATGGTCTATCCCGGGATGAGCTTTATGAAGAATTGAAGAAATACAATGTAATTTCACGAAAATACTTCTAT
CCACTCTGCAGCAATTTCCAGTGCTATAGAGACATTCCATCTGCATCAATATCAAGGCTCCCGGTAGCAAATAAAATTGC
AGAAATGGTTCTTGCTCTCCCACTGCATGGAAGAATGCTCAATAGTGATGTAGAAAATATTTGTAGCATTATTCAAAGCA
TAAGATCAAGCATCCTATAA

Upstream 100 bases:

>100_bases
CAATAAAGAGTGGGCATTGGAGAATTTCAAATTTTTTAATGATAATGCAAATTGATTAATAAAGTAGGAAAGTTTTATAC
CGATTCAAGGAGGTGCAAAT

Downstream 100 bases:

>100_bases
TACCATTACCATAAAATTTTAAAAAAAGCTGGAAATGCAAATTGGATTCATTATGTGATAAATGTTAAATTTGAGCATAT
GGGGGCTAATTATGAAAGAT

Product: DegT/DnrJ/EryC1/StrS family aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLSVFSNGTTALQLACKVLRLSG
EVITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLIESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYD
AAHAFGVEIDGKPISSFGDISMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITEPGTNGKLNEVQAAV
GILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKHNYPYFVIRVDKKEYGLSRDELYEELKKYNVISRKYFY
PLCSNFQCYRDIPSASISRLPVANKIAEMVLALPLHGRMLNSDVENICSIIQSIRSSIL

Sequences:

>Translated_379_residues
MTAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLSVFSNGTTALQLACKVLRLSG
EVITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLIESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYD
AAHAFGVEIDGKPISSFGDISMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITEPGTNGKLNEVQAAV
GILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKHNYPYFVIRVDKKEYGLSRDELYEELKKYNVISRKYFY
PLCSNFQCYRDIPSASISRLPVANKIAEMVLALPLHGRMLNSDVENICSIIQSIRSSIL
>Mature_378_residues
TAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLSVFSNGTTALQLACKVLRLSGE
VITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLIESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYDA
AHAFGVEIDGKPISSFGDISMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITEPGTNGKLNEVQAAVG
ILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKHNYPYFVIRVDKKEYGLSRDELYEELKKYNVISRKYFYP
LCSNFQCYRDIPSASISRLPVANKIAEMVLALPLHGRMLNSDVENICSIIQSIRSSIL

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=364, Percent_Identity=28.5714285714286, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI2367285, Length=308, Percent_Identity=27.2727272727273, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42922; Mature: 42791

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLS
CCCHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHH
VFSNGTTALQLACKVLRLSGEVITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLI
HHCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHH
ESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYDAAHAFGVEIDGKPISSFGDI
HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHCEEECCCCCCCCCCC
SMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITEPGTNGKLNEVQAAV
HHHEEHHHHHEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
GILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKHNYPYFVIRVDKKEYGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCC
RDELYEELKKYNVISRKYFYPLCSNFQCYRDIPSASISRLPVANKIAEMVLALPLHGRML
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCHHH
NSDVENICSIIQSIRSSIL
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAERFTKPFYITQPLLPDINQMNEMIKEIWESNQLSNNGNMVKQLERDLSNFLNTDYLS
CCHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHH
VFSNGTTALQLACKVLRLSGEVITTPFTFAATVHSLPWNNIKPIFCDIEEDTFNINPDLI
HHCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHH
ESLITQDTTAIMPVHVFGTPCNVEKIQRIADKHGLKVLYDAAHAFGVEIDGKPISSFGDI
HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHCEEECCCCCCCCCCC
SMFSFHATKIYHTIEGGALTFKDAYSKERADSLRNFGIQGIDNITEPGTNGKLNEVQAAV
HHHEEHHHHHEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
GILLLKMVEDEIEKRKEITNLYRKLLENIPGITTSKDIEGVKHNYPYFVIRVDKKEYGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCC
RDELYEELKKYNVISRKYFYPLCSNFQCYRDIPSASISRLPVANKIAEMVLALPLHGRML
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCHHH
NSDVENICSIIQSIRSSIL
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]