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The map label for this gene is 226949337

Identifier: 226949337

GI number: 226949337

Start: 2332829

End: 2333398

Strand: Reverse

Name: 226949337

Synonym: CLM_2258

Alternate gene names: NA

Gene position: 2333398-2332829 (Counterclockwise)

Preceding gene: 226949338

Following gene: 226949336

Centisome position: 56.16

GC content: 34.56

Gene sequence:

>570_bases
TTGGCTCAGCAATATACCAAAAAAATGATTCGTGAGGTATTTATAAAGATGCTGAATGAGCGTCCACTTAACAAGATCAC
AGTTAAGGATATTGCTACAGCATGTGAGATAAATAGAAATACTTTTTATTATTATTACACAGATATATATGCACTTTTGT
CAGAGATATTCCAAACAGAACTTGAGACAGTAATTGATGAATATAATGATACACTTTCCTGGGAGGAGAGTTTTATTGTA
GCTGCTAAATTTGCTTTAGAAAATAAAACAGCCGTTTATCATGTATATAATTCTATGCAGAGGGAAGAACTAGTGAACTA
TATATACAATGTATCAGGAAATGTGATGATTCGGTATGTTGAAAAAGTAAGCGAGGGTATCTCAGCTTCTTTGGAAGATA
GAAAACTTATTGCTTCCTTTTATCAGTGTGCCCTCACTGAAATGGTACTACAGTGGATTGCTGCCGGAATGAAGGAGGAT
CCTGATACTATCATTAAACGAATTGGATATCTCTTCGATGGAAACATCGAATTATCCCTTAAACGAAGTGCTGGTTTAAA
TGATACCTAG

Upstream 100 bases:

>100_bases
TATGTGTTAGTGCAACAGTTCCTTGATAATGGATTATTTAAAAATAACTTACCCTGTGGTATAATTTTGAATATAGATAA
AGCATTAAGGGGGTGGCGAT

Downstream 100 bases:

>100_bases
TAAAAAGCAATAGGAGACTTCTTTTTATCAGACATTCTAACATCAATGCCTAAAAATTAGATAAACAAACTGCGGTGTTC
GAATTTCGAACACCGCAGTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Transcriptional Regulator; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MAQQYTKKMIREVFIKMLNERPLNKITVKDIATACEINRNTFYYYYTDIYALLSEIFQTELETVIDEYNDTLSWEESFIV
AAKFALENKTAVYHVYNSMQREELVNYIYNVSGNVMIRYVEKVSEGISASLEDRKLIASFYQCALTEMVLQWIAAGMKED
PDTIIKRIGYLFDGNIELSLKRSAGLNDT

Sequences:

>Translated_189_residues
MAQQYTKKMIREVFIKMLNERPLNKITVKDIATACEINRNTFYYYYTDIYALLSEIFQTELETVIDEYNDTLSWEESFIV
AAKFALENKTAVYHVYNSMQREELVNYIYNVSGNVMIRYVEKVSEGISASLEDRKLIASFYQCALTEMVLQWIAAGMKED
PDTIIKRIGYLFDGNIELSLKRSAGLNDT
>Mature_188_residues
AQQYTKKMIREVFIKMLNERPLNKITVKDIATACEINRNTFYYYYTDIYALLSEIFQTELETVIDEYNDTLSWEESFIVA
AKFALENKTAVYHVYNSMQREELVNYIYNVSGNVMIRYVEKVSEGISASLEDRKLIASFYQCALTEMVLQWIAAGMKEDP
DTIIKRIGYLFDGNIELSLKRSAGLNDT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21992; Mature: 21861

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQYTKKMIREVFIKMLNERPLNKITVKDIATACEINRNTFYYYYTDIYALLSEIFQTE
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
LETVIDEYNDTLSWEESFIVAAKFALENKTAVYHVYNSMQREELVNYIYNVSGNVMIRYV
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EKVSEGISASLEDRKLIASFYQCALTEMVLQWIAAGMKEDPDTIIKRIGYLFDGNIELSL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEE
KRSAGLNDT
ECCCCCCCC
>Mature Secondary Structure 
AQQYTKKMIREVFIKMLNERPLNKITVKDIATACEINRNTFYYYYTDIYALLSEIFQTE
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
LETVIDEYNDTLSWEESFIVAAKFALENKTAVYHVYNSMQREELVNYIYNVSGNVMIRYV
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EKVSEGISASLEDRKLIASFYQCALTEMVLQWIAAGMKEDPDTIIKRIGYLFDGNIELSL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEE
KRSAGLNDT
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA