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The map label for this gene is yhfX [C]

Identifier: 226949300

GI number: 226949300

Start: 2285682

End: 2286743

Strand: Reverse

Name: yhfX [C]

Synonym: CLM_2219

Alternate gene names: 226949300

Gene position: 2286743-2285682 (Counterclockwise)

Preceding gene: 226949301

Following gene: 226949299

Centisome position: 55.03

GC content: 28.72

Gene sequence:

>1062_bases
ATGTCTTATCCAAGGGTTGAAGTAGATACTAAAAAAATTAGATATAATACTAAGATTCTAGTAGAGGAATGTAAAAAAAG
AGGAATAAAAGTAGTGGCAGTAACTAAAACATTTTGTGGAAATCCTAAAATTGCAAAGGCCATTGCAGAAGAAGAAGTAG
ATATTCTAGCAGATTCCAGAATAGAAAATTTAAAAAAATTAGTCCATATTAATTTGCCTAAAATGCTTCTAAGATTACCT
ATGGTAAGTCAGGTAGAGGAAGTAGTAAAATATGCAGATATTTCACTTGTATCAGATATTATTACTATAAGGGAACTTTC
TAAAGAGGCTATAAAACAAAATAAGATACATAGTATTATATTGATGATAGATTTAGGAGATCTAAGGGAAGGCATATTTA
ATGAAGAGGAGATTTATATTACGGTAAAAGAAATACTTGATTTTAAAAGTATAAAACTAATGGGTATAGGAACAAATCTG
TCCTGTTATGGCGGAGTCATTCCTACGTATGAAAACTTATCACAGTTAGTTAATATAGAGAAAAATATAGAAAATAAGTT
TAATATAAAAATAGAGGTTATTTCAGGAGGAAATTCTGGATCTATTAGTTTATTTAAGGATAACAAAATGCCACAAGAAA
TTAATCAATTAAGATTAGGAGCCTCCATATCTTTAGGAATAGGATTAAATGATAAACACATAGAACCTCTTTTAAAAGAT
GCATTTAAGTTAGTGATAGAGATAGTGGAAGTGAAAAACAAGCCTTCAGTGCCTATTGGAACTATTGGATTAGATGCCTT
TGGTAATAAACCATTTTTTGAGGATAAAGGTATTATGAAAAGAGCTATATGTGCCATAGGAAGGCAAGATATTAGTCCAG
ATAACTTAATACCCATAGATGATAATATATCAGTTTTAGGGGCAAGTAGTGACCATCTTTTATTAGATATTACAAATTGT
AATAAGGATTATAAAATAGGTGATAAAATAGAATTTAATGTTACCTTTGGAGGATGTTTATCGGTAATGACATCTGAATA
TGTTTATAAAGTTATATTATAA

Upstream 100 bases:

>100_bases
TTTATAGGATTGCATTAAAAATTTGAAGAATGTATTATTATTATGTATAATAGTATAAAAATACGACAATAAAATATTAT
AAATTAGGCAGGTGTATATA

Downstream 100 bases:

>100_bases
ATTTATATTATAAATTTTTTAGTCATTCTTTTATATTTTTGTATTTTAACAAGAATATTATATGAAAAGAGTGACTTTTG
TTTTGTATAGATAATGTTAG

Product: alanine racemase, N-terminal domain-containing protein

Products: NA

Alternate protein names: Alanine Racemase Domain Protein; Alanine Racemase Domain-Containing Protein; Alanine Racemase N-Terminal Domain Family; Alanine Racemase N-Terminal Domain Protein; Alanine Racemase-Like Protein; Ornithine Racemase; Alanine Racemase N-Terminal

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTFCGNPKIAKAIAEEEVDILADSRIENLKKLVHINLPKMLLRLP
MVSQVEEVVKYADISLVSDIITIRELSKEAIKQNKIHSIILMIDLGDLREGIFNEEEIYITVKEILDFKSIKLMGIGTNL
SCYGGVIPTYENLSQLVNIEKNIENKFNIKIEVISGGNSGSISLFKDNKMPQEINQLRLGASISLGIGLNDKHIEPLLKD
AFKLVIEIVEVKNKPSVPIGTIGLDAFGNKPFFEDKGIMKRAICAIGRQDISPDNLIPIDDNISVLGASSDHLLLDITNC
NKDYKIGDKIEFNVTFGGCLSVMTSEYVYKVIL

Sequences:

>Translated_353_residues
MSYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTFCGNPKIAKAIAEEEVDILADSRIENLKKLVHINLPKMLLRLP
MVSQVEEVVKYADISLVSDIITIRELSKEAIKQNKIHSIILMIDLGDLREGIFNEEEIYITVKEILDFKSIKLMGIGTNL
SCYGGVIPTYENLSQLVNIEKNIENKFNIKIEVISGGNSGSISLFKDNKMPQEINQLRLGASISLGIGLNDKHIEPLLKD
AFKLVIEIVEVKNKPSVPIGTIGLDAFGNKPFFEDKGIMKRAICAIGRQDISPDNLIPIDDNISVLGASSDHLLLDITNC
NKDYKIGDKIEFNVTFGGCLSVMTSEYVYKVIL
>Mature_352_residues
SYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTFCGNPKIAKAIAEEEVDILADSRIENLKKLVHINLPKMLLRLPM
VSQVEEVVKYADISLVSDIITIRELSKEAIKQNKIHSIILMIDLGDLREGIFNEEEIYITVKEILDFKSIKLMGIGTNLS
CYGGVIPTYENLSQLVNIEKNIENKFNIKIEVISGGNSGSISLFKDNKMPQEINQLRLGASISLGIGLNDKHIEPLLKDA
FKLVIEIVEVKNKPSVPIGTIGLDAFGNKPFFEDKGIMKRAICAIGRQDISPDNLIPIDDNISVLGASSDHLLLDITNCN
KDYKIGDKIEFNVTFGGCLSVMTSEYVYKVIL

Specific function: Unknown

COG id: COG3457

COG function: function code E; Predicted amino acid racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39383; Mature: 39252

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTFCGNPKIAKAIAEEEVDILADSR
CCCCCEEECHHEEEECHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
IENLKKLVHINLPKMLLRLPMVSQVEEVVKYADISLVSDIITIRELSKEAIKQNKIHSII
HHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LMIDLGDLREGIFNEEEIYITVKEILDFKSIKLMGIGTNLSCYGGVIPTYENLSQLVNIE
EEEECCHHHHCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
KNIENKFNIKIEVISGGNSGSISLFKDNKMPQEINQLRLGASISLGIGLNDKHIEPLLKD
HCCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
AFKLVIEIVEVKNKPSVPIGTIGLDAFGNKPFFEDKGIMKRAICAIGRQDISPDNLIPID
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECC
DNISVLGASSDHLLLDITNCNKDYKIGDKIEFNVTFGGCLSVMTSEYVYKVIL
CCCEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTFCGNPKIAKAIAEEEVDILADSR
CCCCEEECHHEEEECHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
IENLKKLVHINLPKMLLRLPMVSQVEEVVKYADISLVSDIITIRELSKEAIKQNKIHSII
HHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LMIDLGDLREGIFNEEEIYITVKEILDFKSIKLMGIGTNLSCYGGVIPTYENLSQLVNIE
EEEECCHHHHCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
KNIENKFNIKIEVISGGNSGSISLFKDNKMPQEINQLRLGASISLGIGLNDKHIEPLLKD
HCCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
AFKLVIEIVEVKNKPSVPIGTIGLDAFGNKPFFEDKGIMKRAICAIGRQDISPDNLIPID
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECC
DNISVLGASSDHLLLDITNCNKDYKIGDKIEFNVTFGGCLSVMTSEYVYKVIL
CCCEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA