Click here to switch to the map view.

The map label for this gene is 226949201

Identifier: 226949201

GI number: 226949201

Start: 2171425

End: 2171871

Strand: Reverse

Name: 226949201

Synonym: CLM_2120

Alternate gene names: NA

Gene position: 2171871-2171425 (Counterclockwise)

Preceding gene: 226949202

Following gene: 226949200

Centisome position: 52.27

GC content: 22.37

Gene sequence:

>447_bases
ATGTTTAATAAAAAAAGAATAAATAAAGGATATATACTTTTGTATGCATTGTTTATGGGATGCTTATGTATATTTTCTAG
TTTATTTATTCTTAAAATGGAAAACATAAAGTGGCAAAACGGCTGCAAGGAACTTAGAGCTTTAAGCAAAGTAAGTAATG
TACAAAGGGATAGAGAATATGTGTTATCTTATATAGATAAATTTTTTTATGACAATATAGATAATATAAATTCAGATAAT
ATATATAATTTTATAAGAAGTTTAGATAAAAATTTTAAAGTTACTTTAAGTAATAGTTCGGCTTACTTTTATAATGGAGA
TTTAATAATAGATTATTACAAAAATAAGCTTTTTTATAAGCAAGAAAAATACAAAATTTCTACTAAGGATTCTAATATAG
CTTATAAAAGGGAGTATGTATCCTATGAAAGGAAAGTGAGTAATTAA

Upstream 100 bases:

>100_bases
CTAATAATATCTGTAGAGGGGTAAGCGAATTTAATGTAAAAGAAAAGGGTGATGTAATACATTTAAAGATAGTAGGAAAG
AAAGGGAAAGAATATATAAG

Downstream 100 bases:

>100_bases
TTGTTTAAAAATATTAACTTGTTGGAGATGGATAAAAGCAATATATGCTTAAAGGACATGAAATTTAATAGCTTAAAAGA
AAAAAGTGTTATAGAGAATA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MFNKKRINKGYILLYALFMGCLCIFSSLFILKMENIKWQNGCKELRALSKVSNVQRDREYVLSYIDKFFYDNIDNINSDN
IYNFIRSLDKNFKVTLSNSSAYFYNGDLIIDYYKNKLFYKQEKYKISTKDSNIAYKREYVSYERKVSN

Sequences:

>Translated_148_residues
MFNKKRINKGYILLYALFMGCLCIFSSLFILKMENIKWQNGCKELRALSKVSNVQRDREYVLSYIDKFFYDNIDNINSDN
IYNFIRSLDKNFKVTLSNSSAYFYNGDLIIDYYKNKLFYKQEKYKISTKDSNIAYKREYVSYERKVSN
>Mature_148_residues
MFNKKRINKGYILLYALFMGCLCIFSSLFILKMENIKWQNGCKELRALSKVSNVQRDREYVLSYIDKFFYDNIDNINSDN
IYNFIRSLDKNFKVTLSNSSAYFYNGDLIIDYYKNKLFYKQEKYKISTKDSNIAYKREYVSYERKVSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17832; Mature: 17832

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKKRINKGYILLYALFMGCLCIFSSLFILKMENIKWQNGCKELRALSKVSNVQRDREY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLSYIDKFFYDNIDNINSDNIYNFIRSLDKNFKVTLSNSSAYFYNGDLIIDYYKNKLFYK
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCEEEEEECCEEEEEECCCCEEE
QEKYKISTKDSNIAYKREYVSYERKVSN
CCCEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNKKRINKGYILLYALFMGCLCIFSSLFILKMENIKWQNGCKELRALSKVSNVQRDREY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLSYIDKFFYDNIDNINSDNIYNFIRSLDKNFKVTLSNSSAYFYNGDLIIDYYKNKLFYK
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCEEEEEECCEEEEEECCCCEEE
QEKYKISTKDSNIAYKREYVSYERKVSN
CCCEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA