| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is spoIIIAB [H]
Identifier: 226949192
GI number: 226949192
Start: 2165723
End: 2166241
Strand: Reverse
Name: spoIIIAB [H]
Synonym: CLM_2111
Alternate gene names: 226949192
Gene position: 2166241-2165723 (Counterclockwise)
Preceding gene: 226949193
Following gene: 226949191
Centisome position: 52.13
GC content: 25.43
Gene sequence:
>519_bases ATGTTTAAAATTTTAGGAAGTTTATTAATTTTTGTTGGAAGTTTATATTGGGGTATAACTACTGCTAATAAATTTAAATA TAGAAGAGATGAACTTTTAGAATTGGAGCGATGTATAAATGAACTGAAAAATGAAATAACCTATACCTATACTTCCATAC CAGATATATTAATGAATATATCCTTAAAAAGTAAAAAACCTATAAGTACTTTGTTTAAAAAAATTTCCAATATGCTCTAT GATAATAAAGTAAATAGTATTTATGAAGCTTTTAGTAAAGGTTTTTCAGAGGAAAAAGATAATATGGCACTAAAAGAGGA AGACATAGATATAATATTAGATTTATCTAAAAATTTAGGTCAGTGGGATCCAAAGGGGCATGAAAACATAATAGAGTTAG CTCTTTATAATTTGAAAAAACAAAGTGATAGAGCAGAGGAAAGCATGATAAAGAATATGAAAATGTATAAATATTTGGGA TTTTCCATAGGAGCTGTATTGGTGATTATATTTATATAA
Upstream 100 bases:
>100_bases AGGTACTTTAGAGTATGTATATGATTTTAACAAGAAAACCAAGCTTTACTGTAGAATAATTTAATAAAAACTTTTCTTAA AAATAGGAGTGTACAAAACT
Downstream 100 bases:
>100_bases AAATACTATATAAAAATATATAGGTTGAAAAGGGGGTATAATATGCTAGACATACAGTTGATTTTTAAGATAGCAGGAGT AAGCATATTGGTTATAATTT
Product: stage III sporulation protein SpoAB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MFKILGSLLIFVGSLYWGITTANKFKYRRDELLELERCINELKNEITYTYTSIPDILMNISLKSKKPISTLFKKISNMLY DNKVNSIYEAFSKGFSEEKDNMALKEEDIDIILDLSKNLGQWDPKGHENIIELALYNLKKQSDRAEESMIKNMKMYKYLG FSIGAVLVIIFI
Sequences:
>Translated_172_residues MFKILGSLLIFVGSLYWGITTANKFKYRRDELLELERCINELKNEITYTYTSIPDILMNISLKSKKPISTLFKKISNMLY DNKVNSIYEAFSKGFSEEKDNMALKEEDIDIILDLSKNLGQWDPKGHENIIELALYNLKKQSDRAEESMIKNMKMYKYLG FSIGAVLVIIFI >Mature_172_residues MFKILGSLLIFVGSLYWGITTANKFKYRRDELLELERCINELKNEITYTYTSIPDILMNISLKSKKPISTLFKKISNMLY DNKVNSIYEAFSKGFSEEKDNMALKEEDIDIILDLSKNLGQWDPKGHENIIELALYNLKKQSDRAEESMIKNMKMYKYLG FSIGAVLVIIFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014198 [H]
Pfam domain/function: PF09548 Spore_III_AB [H]
EC number: NA
Molecular weight: Translated: 20002; Mature: 20002
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKILGSLLIFVGSLYWGITTANKFKYRRDELLELERCINELKNEITYTYTSIPDILMNI CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHC SLKSKKPISTLFKKISNMLYDNKVNSIYEAFSKGFSEEKDNMALKEEDIDIILDLSKNLG CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEECHHCCC QWDPKGHENIIELALYNLKKQSDRAEESMIKNMKMYKYLGFSIGAVLVIIFI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFKILGSLLIFVGSLYWGITTANKFKYRRDELLELERCINELKNEITYTYTSIPDILMNI CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHC SLKSKKPISTLFKKISNMLYDNKVNSIYEAFSKGFSEEKDNMALKEEDIDIILDLSKNLG CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEECHHCCC QWDPKGHENIIELALYNLKKQSDRAEESMIKNMKMYKYLGFSIGAVLVIIFI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 1766372 [H]