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The map label for this gene is scpA [H]

Identifier: 226949101

GI number: 226949101

Start: 2085531

End: 2086277

Strand: Reverse

Name: scpA [H]

Synonym: CLM_2017

Alternate gene names: 226949101

Gene position: 2086277-2085531 (Counterclockwise)

Preceding gene: 226949102

Following gene: 226949100

Centisome position: 50.21

GC content: 23.29

Gene sequence:

>747_bases
ATGCCATTAAATATAAAAATACATAATTTCGATGGACCTTTTGACTTATTACTACACTTAATTAAAAAGAATAAAATGGA
AATATATGATGTAAGTATATATGAAATAACTAATCAGTATTTACAATACCTAAATCAAATGGAAGAGTTAGACTTAGAAA
TAACTTCAGAGTTTATAGTTATGGCAGCTACCTTGATTGAAATAAAATCTAAATATTTATTACCTAAAGTAGAAGAAGAA
AAAGAGGAAGAGGAGAATGATCCTCAAAAAGAACTTTTAAACAAACTTTTAGAATACAAAAAATTTAAAGCTGCTGCAGA
GTTTTTTAAAAACCGTCAGCAGATAAGTGGAACATCATTTAGTAAAAAACCAGAAATTATAGAAGTTAAAAATAAAGAAA
CAACCACAGAAGAATTACTTAAAGATGTAACAATGTTAAGCTTATATAATACATATAATGATTTAATAAGTAAATATTCA
AATAAAATGAATGAAAATGTGGAATTTAAAGGAGAAATACAATTAGATAAATATAAAATAGAAGATAAGATAAAATATAT
TGGTAAAAAAATAAACTCAAAAGAAAAATGGCTTTTTTCTGATTTTATAAAAGAATGTAGTTGCAAAATGGAAATAGTGG
TAACTTTTTTAGCTATACTAGAGCTTATAAAGTTAAAAACAATACAAGTATATCAATCTAATAATTTTAATGATATATAT
ATAGAAAGAGGCGTTGTATGTGAATAA

Upstream 100 bases:

>100_bases
GAAATAGGATTAATATTAGAATATATGAAAAAATATAAAATTAATTTAGGATTATTAGATGAAGAAAATTTTTTAATATA
TAATATGGGAGAGATAAAAA

Downstream 100 bases:

>100_bases
AGATCATGAAGAGCAATTAGAAATAAACGAAGTATCACAAAAAAATAAATATAAATCTATAATAGAATCCCTTCTATTTA
TGAGTGGAGAACCTATTAAT

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIVMAATLIEIKSKYLLPKVEEE
KEEEENDPQKELLNKLLEYKKFKAAAEFFKNRQQISGTSFSKKPEIIEVKNKETTTEELLKDVTMLSLYNTYNDLISKYS
NKMNENVEFKGEIQLDKYKIEDKIKYIGKKINSKEKWLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIY
IERGVVCE

Sequences:

>Translated_248_residues
MPLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIVMAATLIEIKSKYLLPKVEEE
KEEEENDPQKELLNKLLEYKKFKAAAEFFKNRQQISGTSFSKKPEIIEVKNKETTTEELLKDVTMLSLYNTYNDLISKYS
NKMNENVEFKGEIQLDKYKIEDKIKYIGKKINSKEKWLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIY
IERGVVCE
>Mature_247_residues
PLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIVMAATLIEIKSKYLLPKVEEEK
EEEENDPQKELLNKLLEYKKFKAAAEFFKNRQQISGTSFSKKPEIIEVKNKETTTEELLKDVTMLSLYNTYNDLISKYSN
KMNENVEFKGEIQLDKYKIEDKIKYIGKKINSKEKWLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIYI
ERGVVCE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29398; Mature: 29267

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIV
CCCEEEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MAATLIEIKSKYLLPKVEEEKEEEENDPQKELLNKLLEYKKFKAAAEFFKNRQQISGTSF
HHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKKPEIIEVKNKETTTEELLKDVTMLSLYNTYNDLISKYSNKMNENVEFKGEIQLDKYKI
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHH
EDKIKYIGKKINSKEKWLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIY
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEE
IERGVVCE
EECCCCCC
>Mature Secondary Structure 
PLNIKIHNFDGPFDLLLHLIKKNKMEIYDVSIYEITNQYLQYLNQMEELDLEITSEFIV
CCEEEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MAATLIEIKSKYLLPKVEEEKEEEENDPQKELLNKLLEYKKFKAAAEFFKNRQQISGTSF
HHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKKPEIIEVKNKETTTEELLKDVTMLSLYNTYNDLISKYSNKMNENVEFKGEIQLDKYKI
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHH
EDKIKYIGKKINSKEKWLFSDFIKECSCKMEIVVTFLAILELIKLKTIQVYQSNNFNDIY
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEE
IERGVVCE
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]