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The map label for this gene is yhaM [C]

Identifier: 226949056

GI number: 226949056

Start: 2035659

End: 2036939

Strand: Reverse

Name: yhaM [C]

Synonym: CLM_1972

Alternate gene names: 226949056

Gene position: 2036939-2035659 (Counterclockwise)

Preceding gene: 226949057

Following gene: 226949055

Centisome position: 49.02

GC content: 29.74

Gene sequence:

>1281_bases
ATGGATGAAAATATTATAATAAATATATTAAGAAAAGAGATGATGCCAGGACTTGGAGTTACAGAACCAGCTTCTATAGC
TCTATCATCTGCTAAAGCCTATGAGGTAATTGGTGGAGAAATAAAAAATATAAAAATCATAGCAGATCCTGGATTATTTA
AAAATGCTTTTTCCTGCTCAATTCCAGGCACAAAGGAAGTTGGTAATGAAATGGCTGCTTTATTAGGAGCAATTTGTGGG
GATGCTTCCTTAGGCTTAGAGTGTTTGAGAAAAATAAAAAAAGAAGATATAAGCAAAGCTAAAACCATGTTAGATAAAAT
TGATATAGAAATAAAATCTCAAACAGAAGGACTTTATGTAGAATCTATAGTAACTACAAACAATGGAATAGGAAGGACTA
TAATAAGATATAAACATGATAATATAGTTTTAGTAGAAAAAAATAATAAAATATTATACCAAAAGGAAAACACTTTAAAC
AAAAGCAATAATTTTTCACAAGAAGCTATAGATTCTAAAAAAATAACTGAAATGAAATTAGATGAAATAGTAGAATTTGT
GAATAATGTTAACTATGAAAAAATAGAATTTTTATTAGAATCAATTAAAATGAATAAGAAATTATCTGAAAAGGGATTAG
AAGGCTTAGGAATAGGCCTTGGTAAGTTAATTCTAGAAAGTTGTAATGAAAATAATTATGAGTTATATGCTGAAGCACTT
ACTTGCAGTGCTATAGATGCTAGGGTATCTGGCGCTACTGTACCTGCCATGACAGTAACAGGTAGTGGTAATCATGGTAT
AATAACTACATTGCCTTTACTTGCTATAAAAGAAAAGAAAAATTTAAATAATGAAGTGTTAGCAAGATCCATAGCTTTAA
GCTATATAATAAATATATATATAAAAGAATTTTCTGGAAAGTTATCTGCTTTTTGTGGCTGCGCCGTAGCTGCGGGTACA
GGAGTTAGCGGGGGAATTTGTTACTTATTAGGTGGTAGTTTAAAAGAAATAGAAAACACAATAAAAAATATGGCATCTAA
CATTACAGGAATGATTTGTACCGGAGGAAATTTAGCTTGTTCACTAAAAGCAAATACCGGGGTAAAGGCGGCTTTTCTAA
GTGCAAAAATGGCCTTAAATAATATAGTAATACCAAATAAATGTGGTATTGTTTCAAATTCTATAGAGGATACAATGAAA
AATATAGGTAGAATAGCTTATCCTGGAATGATGGAAACAGATAAAGAGATATTAAATATAATGATAGAAAGTTCGAAATA
A

Upstream 100 bases:

>100_bases
CTATATTTTTATAAATCAAAGCTTAATTCTAATAAAGCCTTGATTTAATTAGAATTATAACCCCTAGTACAAAATTATAT
ATTATATTTGGAGGAATATT

Downstream 100 bases:

>100_bases
ACTAATTATTCTATAACATCAATCCTCCTCTTGACAGATTTAGATAAAAAGTGTAAATTAAAAATTAATTTGTCATAATT
TGAAGGAGGTTTTAATTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MDENIIINILRKEMMPGLGVTEPASIALSSAKAYEVIGGEIKNIKIIADPGLFKNAFSCSIPGTKEVGNEMAALLGAICG
DASLGLECLRKIKKEDISKAKTMLDKIDIEIKSQTEGLYVESIVTTNNGIGRTIIRYKHDNIVLVEKNNKILYQKENTLN
KSNNFSQEAIDSKKITEMKLDEIVEFVNNVNYEKIEFLLESIKMNKKLSEKGLEGLGIGLGKLILESCNENNYELYAEAL
TCSAIDARVSGATVPAMTVTGSGNHGIITTLPLLAIKEKKNLNNEVLARSIALSYIINIYIKEFSGKLSAFCGCAVAAGT
GVSGGICYLLGGSLKEIENTIKNMASNITGMICTGGNLACSLKANTGVKAAFLSAKMALNNIVIPNKCGIVSNSIEDTMK
NIGRIAYPGMMETDKEILNIMIESSK

Sequences:

>Translated_426_residues
MDENIIINILRKEMMPGLGVTEPASIALSSAKAYEVIGGEIKNIKIIADPGLFKNAFSCSIPGTKEVGNEMAALLGAICG
DASLGLECLRKIKKEDISKAKTMLDKIDIEIKSQTEGLYVESIVTTNNGIGRTIIRYKHDNIVLVEKNNKILYQKENTLN
KSNNFSQEAIDSKKITEMKLDEIVEFVNNVNYEKIEFLLESIKMNKKLSEKGLEGLGIGLGKLILESCNENNYELYAEAL
TCSAIDARVSGATVPAMTVTGSGNHGIITTLPLLAIKEKKNLNNEVLARSIALSYIINIYIKEFSGKLSAFCGCAVAAGT
GVSGGICYLLGGSLKEIENTIKNMASNITGMICTGGNLACSLKANTGVKAAFLSAKMALNNIVIPNKCGIVSNSIEDTMK
NIGRIAYPGMMETDKEILNIMIESSK
>Mature_426_residues
MDENIIINILRKEMMPGLGVTEPASIALSSAKAYEVIGGEIKNIKIIADPGLFKNAFSCSIPGTKEVGNEMAALLGAICG
DASLGLECLRKIKKEDISKAKTMLDKIDIEIKSQTEGLYVESIVTTNNGIGRTIIRYKHDNIVLVEKNNKILYQKENTLN
KSNNFSQEAIDSKKITEMKLDEIVEFVNNVNYEKIEFLLESIKMNKKLSEKGLEGLGIGLGKLILESCNENNYELYAEAL
TCSAIDARVSGATVPAMTVTGSGNHGIITTLPLLAIKEKKNLNNEVLARSIALSYIINIYIKEFSGKLSAFCGCAVAAGT
GVSGGICYLLGGSLKEIENTIKNMASNITGMICTGGNLACSLKANTGVKAAFLSAKMALNNIVIPNKCGIVSNSIEDTMK
NIGRIAYPGMMETDKEILNIMIESSK

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=428, Percent_Identity=32.7102803738318, Blast_Score=215, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 45916; Mature: 45916

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENIIINILRKEMMPGLGVTEPASIALSSAKAYEVIGGEIKNIKIIADPGLFKNAFSCS
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHCCCCEEEEEEEECCCCCCCCEECC
IPGTKEVGNEMAALLGAICGDASLGLECLRKIKKEDISKAKTMLDKIDIEIKSQTEGLYV
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEE
ESIVTTNNGIGRTIIRYKHDNIVLVEKNNKILYQKENTLNKSNNFSQEAIDSKKITEMKL
EEEEECCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHH
DEIVEFVNNVNYEKIEFLLESIKMNKKLSEKGLEGLGIGLGKLILESCNENNYELYAEAL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEHH
TCSAIDARVSGATVPAMTVTGSGNHGIITTLPLLAIKEKKNLNNEVLARSIALSYIINIY
HHHHHHHHCCCCEECEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IKEFSGKLSAFCGCAVAAGTGVSGGICYLLGGSLKEIENTIKNMASNITGMICTGGNLAC
HHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEE
SLKANTGVKAAFLSAKMALNNIVIPNKCGIVSNSIEDTMKNIGRIAYPGMMETDKEILNI
EEECCCCCHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHH
MIESSK
HCCCCC
>Mature Secondary Structure
MDENIIINILRKEMMPGLGVTEPASIALSSAKAYEVIGGEIKNIKIIADPGLFKNAFSCS
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHCCCCEEEEEEEECCCCCCCCEECC
IPGTKEVGNEMAALLGAICGDASLGLECLRKIKKEDISKAKTMLDKIDIEIKSQTEGLYV
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEE
ESIVTTNNGIGRTIIRYKHDNIVLVEKNNKILYQKENTLNKSNNFSQEAIDSKKITEMKL
EEEEECCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHH
DEIVEFVNNVNYEKIEFLLESIKMNKKLSEKGLEGLGIGLGKLILESCNENNYELYAEAL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEHH
TCSAIDARVSGATVPAMTVTGSGNHGIITTLPLLAIKEKKNLNNEVLARSIALSYIINIY
HHHHHHHHCCCCEECEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IKEFSGKLSAFCGCAVAAGTGVSGGICYLLGGSLKEIENTIKNMASNITGMICTGGNLAC
HHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEE
SLKANTGVKAAFLSAKMALNNIVIPNKCGIVSNSIEDTMKNIGRIAYPGMMETDKEILNI
EEECCCCCHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHH
MIESSK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA