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The map label for this gene is cmk

Identifier: 226949049

GI number: 226949049

Start: 2027747

End: 2028400

Strand: Reverse

Name: cmk

Synonym: CLM_1965

Alternate gene names: 226949049

Gene position: 2028400-2027747 (Counterclockwise)

Preceding gene: 226949050

Following gene: 226949048

Centisome position: 48.82

GC content: 27.83

Gene sequence:

>654_bases
ATGTTGGATATATCTATAGCCATAGATGGCCCTGCAGGAGCAGGGAAAAGCACCATAGCAAAAATTATTGGAAACAAATT
AAATATAATGTACATAAATACAGGTTCTATGTATAGGGCAGTAACCCTTATGGCCTTAAAAAATAATATAGAACCCTATG
ATATAGAAAGCCTTAAAGCTTTAATTAATTCCATGAATATAAGTTTTAATGGTAATAATATAATTGTTAATGGAAAAGAC
TTAGAAGAAGATATAAGAATGCCTATAATAAATAATAATGTATCTAAATATGCAGCAGTTGAAGAAGTTAGAGAACTTTT
GGTTTCTATGCAACAAAATATAAGTAAAAAATATAATGTAGTAATGGATGGGCGAGATATAGGTACTGTAGTTCTTAAGG
ATGCCCCTTACAAATTTTTTATTACAGCAAGTGCAGAAGTTAGGGCAAAAAGAAGGTTAAAAGAATTAAAAGAAAAAGGA
ATAAATATAAATTTTCGGGATGTACTAAAGGAAATTAAAGAAAGAGATTATATAGACAGCAATAGAAAAGTTAATCCCCT
AAAACAAAGTAAAGATGCTATTTTAATAGATACTTCTAATTTTACTATAGAAGAAGTAGTTGATAAAATATGTACCATAA
TAAAAAAGGATTAA

Upstream 100 bases:

>100_bases
AAAAGATTTGTTTTCACCAAATTAAAGGAATTTTTATAGATTTTATAGAATATAAAATTATATAGTGTTAATTATAAATG
CATTAAGGAAAGGCGGAATA

Downstream 100 bases:

>100_bases
GAAACAATCATGAATCCTATAAAAAAAGCAATATTAAAACTAATGAAGTTAGGAGAATAGAAGATGAATGTAATTTTAGC
AGATAAAGCAGGGTTTTGCT

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLDISIAIDGPAGAGKSTIAKIIGNKLNIMYINTGSMYRAVTLMALKNNIEPYDIESLKALINSMNISFNGNNIIVNGKD
LEEDIRMPIINNNVSKYAAVEEVRELLVSMQQNISKKYNVVMDGRDIGTVVLKDAPYKFFITASAEVRAKRRLKELKEKG
ININFRDVLKEIKERDYIDSNRKVNPLKQSKDAILIDTSNFTIEEVVDKICTIIKKD

Sequences:

>Translated_217_residues
MLDISIAIDGPAGAGKSTIAKIIGNKLNIMYINTGSMYRAVTLMALKNNIEPYDIESLKALINSMNISFNGNNIIVNGKD
LEEDIRMPIINNNVSKYAAVEEVRELLVSMQQNISKKYNVVMDGRDIGTVVLKDAPYKFFITASAEVRAKRRLKELKEKG
ININFRDVLKEIKERDYIDSNRKVNPLKQSKDAILIDTSNFTIEEVVDKICTIIKKD
>Mature_217_residues
MLDISIAIDGPAGAGKSTIAKIIGNKLNIMYINTGSMYRAVTLMALKNNIEPYDIESLKALINSMNISFNGNNIIVNGKD
LEEDIRMPIINNNVSKYAAVEEVRELLVSMQQNISKKYNVVMDGRDIGTVVLKDAPYKFFITASAEVRAKRRLKELKEKG
ININFRDVLKEIKERDYIDSNRKVNPLKQSKDAILIDTSNFTIEEVVDKICTIIKKD

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1787139, Length=208, Percent_Identity=40.3846153846154, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KCY_CLOB1 (A7FUL8)

Other databases:

- EMBL:   CP000726
- RefSeq:   YP_001384065.1
- ProteinModelPortal:   A7FUL8
- SMR:   A7FUL8
- STRING:   A7FUL8
- GeneID:   5396113
- GenomeReviews:   CP000726_GR
- KEGG:   cba:CLB_1743
- eggNOG:   COG0283
- HOGENOM:   HBG354377
- OMA:   DIGTVIC
- ProtClustDB:   PRK00023
- BioCyc:   CBOT441770:CLB_1743-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00238
- InterPro:   IPR003136
- InterPro:   IPR011994
- PANTHER:   PTHR21299:SF2
- TIGRFAMs:   TIGR00017

Pfam domain/function: PF02224 Cytidylate_kin

EC number: =2.7.4.14

Molecular weight: Translated: 24445; Mature: 24445

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDISIAIDGPAGAGKSTIAKIIGNKLNIMYINTGSMYRAVTLMALKNNIEPYDIESLKA
CEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHH
LINSMNISFNGNNIIVNGKDLEEDIRMPIINNNVSKYAAVEEVRELLVSMQQNISKKYNV
HHHHCCEEECCCEEEECCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCEE
VMDGRDIGTVVLKDAPYKFFITASAEVRAKRRLKELKEKGININFRDVLKEIKERDYIDS
EECCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
NRKVNPLKQSKDAILIDTSNFTIEEVVDKICTIIKKD
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDISIAIDGPAGAGKSTIAKIIGNKLNIMYINTGSMYRAVTLMALKNNIEPYDIESLKA
CEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHH
LINSMNISFNGNNIIVNGKDLEEDIRMPIINNNVSKYAAVEEVRELLVSMQQNISKKYNV
HHHHCCEEECCCEEEECCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCEE
VMDGRDIGTVVLKDAPYKFFITASAEVRAKRRLKELKEKGININFRDVLKEIKERDYIDS
EECCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
NRKVNPLKQSKDAILIDTSNFTIEEVVDKICTIIKKD
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA