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The map label for this gene is 226948979

Identifier: 226948979

GI number: 226948979

Start: 1939745

End: 1940119

Strand: Direct

Name: 226948979

Synonym: CLM_1893

Alternate gene names: NA

Gene position: 1939745-1940119 (Clockwise)

Preceding gene: 226948978

Following gene: 226948980

Centisome position: 46.68

GC content: 31.73

Gene sequence:

>375_bases
TTGAAACATACAAAAGCTAAAGCTATGCTTATAGAATGTTGTTTCTGTGATAATGCAGGAGATATGAACAGATACAATGC
CGAAAATATGGCAAATGCTATTGAAAAAGGATTAGTAGGGAAAACTACAAGCAATAGTACCCCAAGCAACTTAATGGGTA
ACAATAATAGTAGGATTAATTTGGATGGTAAAACAGGTACTATAAATACACCAAGTGGTGTAAATGTACAATCAGGCAAG
TCTACAAATTCTAAAATATTAGGAACATTAGCTAATGGAGCAAAGGTTAAGTTATATAGAAAAGAAGGAGAGTGGATATA
CATATATTACCCACCACATGGTGGTTATGTTTATGGTAAATATATAAGATATTAA

Upstream 100 bases:

>100_bases
CGGAGGTAAGGAGCTATCACAGGCAAGGGCTATACTAAATAATATTTGCACTTTAGAATATACAAACAGAGGGTTAAAAG
ACGGTTATGGTCTTTATGTA

Downstream 100 bases:

>100_bases
ATTTTAGAGGTACTTTTGTAATGGGACTACCTTTTTGCATTATTTCATTGAAAAATGATGTAAAATGTATGAATTCTTGG
GAAAAATTATAAAGGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Bacteriophage Endolysin

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKHTKAKAMLIECCFCDNAGDMNRYNAENMANAIEKGLVGKTTSNSTPSNLMGNNNSRINLDGKTGTINTPSGVNVQSGK
STNSKILGTLANGAKVKLYRKEGEWIYIYYPPHGGYVYGKYIRY

Sequences:

>Translated_124_residues
MKHTKAKAMLIECCFCDNAGDMNRYNAENMANAIEKGLVGKTTSNSTPSNLMGNNNSRINLDGKTGTINTPSGVNVQSGK
STNSKILGTLANGAKVKLYRKEGEWIYIYYPPHGGYVYGKYIRY
>Mature_124_residues
MKHTKAKAMLIECCFCDNAGDMNRYNAENMANAIEKGLVGKTTSNSTPSNLMGNNNSRINLDGKTGTINTPSGVNVQSGK
STNSKILGTLANGAKVKLYRKEGEWIYIYYPPHGGYVYGKYIRY

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13609; Mature: 13609

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTKAKAMLIECCFCDNAGDMNRYNAENMANAIEKGLVGKTTSNSTPSNLMGNNNSRIN
CCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LDGKTGTINTPSGVNVQSGKSTNSKILGTLANGAKVKLYRKEGEWIYIYYPPHGGYVYGK
ECCCCCCEECCCCCEECCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEECCCCCEEEEE
YIRY
EECC
>Mature Secondary Structure
MKHTKAKAMLIECCFCDNAGDMNRYNAENMANAIEKGLVGKTTSNSTPSNLMGNNNSRIN
CCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LDGKTGTINTPSGVNVQSGKSTNSKILGTLANGAKVKLYRKEGEWIYIYYPPHGGYVYGK
ECCCCCCEECCCCCEECCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEECCCCCEEEEE
YIRY
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA