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The map label for this gene is 226948971

Identifier: 226948971

GI number: 226948971

Start: 1931552

End: 1932439

Strand: Direct

Name: 226948971

Synonym: CLM_1885

Alternate gene names: NA

Gene position: 1931552-1932439 (Clockwise)

Preceding gene: 226948970

Following gene: 226948972

Centisome position: 46.48

GC content: 34.23

Gene sequence:

>888_bases
GTGTATAAAATAATTGAAAAAAAAGAATTAGCACCGAAAATATATTCTATTGAAATAGAAGCAAAAAGGGTGGCTAAATC
AGCAAAACCAGGACAATTTATTATAGTGAGAATAGATGAGAAGGGAGAAAGAATCCCACTTACTGTAGCAGATTATAATA
AAGAAAAAGGAACGGTAACTATAGTTGTACAGGCTGTTGGATCTTCAACTAATAGAATGGTGCAGCTTGAAGTAGGGGAC
TATTTTATGGATTTTGTTGGACCACTTGGTAAGCCATCAGAATTTGTAGAAGAGGATTTAGAAAGTCTTAAAAATATGAA
ATTAATTTTTGTAGCAGGTGGAGTAGGCGCAGCACCTGTATACCCTCAAGTAAAATGGCTTTGTGAAAGAGGAATAAAAC
CAGAGGTTATAATAGGGGGAAAAAGCAAAGAATTTATATTGTTAGAAAAAGAAATGATAGATTTAGGAGCAAAGGTATAC
CCTTGTACAGATGACGGTTCTTATGGATTCTATGGGCTTGTAACTAATAAATTAAAAGAATTAATAGATAGTGGAGAAAA
TTATGATAGAGTAATAACTATCGGTCCTATGATAATGATGTATTTTGTAACTAAGTTAACAAAGGAATACAAATTACCTA
CAATTGCAAGTTTAAACACACTTATGGTAGATGGGACAGGAATGTGTGGAGCCTGCAGGGTAACTGTAGGAGGAGAAACA
AAATTCACTTGCGTAGATGGACCAGAATTTGATGCACATCTAGTAGATTTTGATGAAGCTATGAAAAGACAAGCTTTATA
TAAAACAGAAGAAGGAAAAAGGCTTCATAAAATAGAAGAAGAAAAAGAAGGTCACGTATGTCATATCGGAGCGGGGGAGA
ATGCGTAA

Upstream 100 bases:

>100_bases
ATTTTAAATATTTGAATTTTTAAGAAGTATGATATATATTATTCTTTGTAAGGAAAATTTTTAGATTTATATTAATTGGG
AGAGAATAGGGGGAATAAAA

Downstream 100 bases:

>100_bases
TGGATAGAATGAAAAAGGTATCAGTTAGAGAACAAGATCCAAAGGTAAGAGCTACTAATTTTGAAGAAGTTTGTTTAGGA
TATAATGAAGAAGAAGCTGT

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MYKIIEKKELAPKIYSIEIEAKRVAKSAKPGQFIIVRIDEKGERIPLTVADYNKEKGTVTIVVQAVGSSTNRMVQLEVGD
YFMDFVGPLGKPSEFVEEDLESLKNMKLIFVAGGVGAAPVYPQVKWLCERGIKPEVIIGGKSKEFILLEKEMIDLGAKVY
PCTDDGSYGFYGLVTNKLKELIDSGENYDRVITIGPMIMMYFVTKLTKEYKLPTIASLNTLMVDGTGMCGACRVTVGGET
KFTCVDGPEFDAHLVDFDEAMKRQALYKTEEGKRLHKIEEEKEGHVCHIGAGENA

Sequences:

>Translated_295_residues
MYKIIEKKELAPKIYSIEIEAKRVAKSAKPGQFIIVRIDEKGERIPLTVADYNKEKGTVTIVVQAVGSSTNRMVQLEVGD
YFMDFVGPLGKPSEFVEEDLESLKNMKLIFVAGGVGAAPVYPQVKWLCERGIKPEVIIGGKSKEFILLEKEMIDLGAKVY
PCTDDGSYGFYGLVTNKLKELIDSGENYDRVITIGPMIMMYFVTKLTKEYKLPTIASLNTLMVDGTGMCGACRVTVGGET
KFTCVDGPEFDAHLVDFDEAMKRQALYKTEEGKRLHKIEEEKEGHVCHIGAGENA
>Mature_295_residues
MYKIIEKKELAPKIYSIEIEAKRVAKSAKPGQFIIVRIDEKGERIPLTVADYNKEKGTVTIVVQAVGSSTNRMVQLEVGD
YFMDFVGPLGKPSEFVEEDLESLKNMKLIFVAGGVGAAPVYPQVKWLCERGIKPEVIIGGKSKEFILLEKEMIDLGAKVY
PCTDDGSYGFYGLVTNKLKELIDSGENYDRVITIGPMIMMYFVTKLTKEYKLPTIASLNTLMVDGTGMCGACRVTVGGET
KFTCVDGPEFDAHLVDFDEAMKRQALYKTEEGKRLHKIEEEKEGHVCHIGAGENA

Specific function: Unknown

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 32755; Mature: 32755

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKIIEKKELAPKIYSIEIEAKRVAKSAKPGQFIIVRIDEKGERIPLTVADYNKEKGTVT
CCCCCCHHHCCCEEEEEEEEHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEE
IVVQAVGSSTNRMVQLEVGDYFMDFVGPLGKPSEFVEEDLESLKNMKLIFVAGGVGAAPV
EEEEECCCCCCEEEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCC
YPQVKWLCERGIKPEVIIGGKSKEFILLEKEMIDLGAKVYPCTDDGSYGFYGLVTNKLKE
CHHHHHHHHCCCCCEEEECCCCCEEEEEEHHHHHCCCEEEECCCCCCCCEEHHHHHHHHH
LIDSGENYDRVITIGPMIMMYFVTKLTKEYKLPTIASLNTLMVDGTGMCGACRVTVGGET
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCEEEEEEECCCE
KFTCVDGPEFDAHLVDFDEAMKRQALYKTEEGKRLHKIEEEKEGHVCHIGAGENA
EEEEECCCCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCC
>Mature Secondary Structure
MYKIIEKKELAPKIYSIEIEAKRVAKSAKPGQFIIVRIDEKGERIPLTVADYNKEKGTVT
CCCCCCHHHCCCEEEEEEEEHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEE
IVVQAVGSSTNRMVQLEVGDYFMDFVGPLGKPSEFVEEDLESLKNMKLIFVAGGVGAAPV
EEEEECCCCCCEEEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCC
YPQVKWLCERGIKPEVIIGGKSKEFILLEKEMIDLGAKVYPCTDDGSYGFYGLVTNKLKE
CHHHHHHHHCCCCCEEEECCCCCEEEEEEHHHHHCCCEEEECCCCCCCCEEHHHHHHHHH
LIDSGENYDRVITIGPMIMMYFVTKLTKEYKLPTIASLNTLMVDGTGMCGACRVTVGGET
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCEEEEEEECCCE
KFTCVDGPEFDAHLVDFDEAMKRQALYKTEEGKRLHKIEEEKEGHVCHIGAGENA
EEEEECCCCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA