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The map label for this gene is 226948875

Identifier: 226948875

GI number: 226948875

Start: 1816125

End: 1816979

Strand: Direct

Name: 226948875

Synonym: CLM_1777

Alternate gene names: NA

Gene position: 1816125-1816979 (Clockwise)

Preceding gene: 226948874

Following gene: 226948876

Centisome position: 43.71

GC content: 30.18

Gene sequence:

>855_bases
ATGGCAAAAATAAGTTTAGATAATTTAATTAGTAAAGTTGATGATATGCCTGTTCTACCAGAGAGAATAAATAGAATAAT
ATCTCTTGCAGAAGATCCTTATTCTACAGTAGAGGAACTGGAAAAGGAGATATTAACTGACCAAAGTCTTACATCAAAAA
TATTAAAATTAGCAAATTCAACCTATTATGGATATGCTAGAAGAATTGATACTGTGTCAGAAGCTGCTGTGCTTTTAGGT
GCTCAAGCAATAAAAAGTTTGGCTCTTGCATCAGCAGTAAGTGAATATCTTGTAAAAGAACTTCCAGGAGGATATGGTCT
TGAGAAATACGAGCTTTGGAATCAATCTCAAAGTTGTGCTATAATAGCAAGATTTATAGCCAAAAAATTAAAATATCCCA
AAGCTGAACAAGCCTATGTTGCAGGTCTTATAAGAGATATTGGTAAAACTATATTAAATTATTATGTAGCTAAAGAATAT
CAAACAATAATAAATAAAGTAGATGAAGATGGAAAAACCTTTGTAGAAGCAGAGGAAGAGATTCTTGGATTTAATCATGG
AGAAGTAGGAGCTAAAATAGCTGAAAAATGGAATTTTCCATTATCTTTAGTAGAGAGTATTCGTTATCATCATTCACCAG
AATTATCAAAAGAAGATCCTAAATTGGTTTCTATAGTACATATAGCGGATTCTATTACTATGATGTTGGGAGTAGGTATT
GGAAATGACGGATTATCCTATAAATTTTCGGATTTTGTCCTTGAAACTTTAAATATAAAAGGAGAAGTTATTGAAAGTAT
AATTTGTGAATCAGTAGATTACTTAAATGATAACGATAGTTTTAATATTATTTAA

Upstream 100 bases:

>100_bases
TAAATGGTAAATATCTATAAAAAGTTTAAGTATTTAATTAGATATAGCGATAATATATAATATTATAAAAAATATTTTAT
ATGAAATGGGTGTTCAAAAT

Downstream 100 bases:

>100_bases
ATGTTGAAAAATTTATAATATATTATTGATGCATAAACCAGATTACATAAATAATCTTTTAGATTATAATATTGATTTAG
TCTTAACTGGACATAGCCAT

Product: HDIG domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANSTYYGYARRIDTVSEAAVLLG
AQAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCAIIARFIAKKLKYPKAEQAYVAGLIRDIGKTILNYYVAKEY
QTIINKVDEDGKTFVEAEEEILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGI
GNDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII

Sequences:

>Translated_284_residues
MAKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANSTYYGYARRIDTVSEAAVLLG
AQAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCAIIARFIAKKLKYPKAEQAYVAGLIRDIGKTILNYYVAKEY
QTIINKVDEDGKTFVEAEEEILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGI
GNDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII
>Mature_283_residues
AKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANSTYYGYARRIDTVSEAAVLLGA
QAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCAIIARFIAKKLKYPKAEQAYVAGLIRDIGKTILNYYVAKEYQ
TIINKVDEDGKTFVEAEEEILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGIG
NDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 31669; Mature: 31537

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANS
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
TYYGYARRIDTVSEAAVLLGAQAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHH
IIARFIAKKLKYPKAEQAYVAGLIRDIGKTILNYYVAKEYQTIINKVDEDGKTFVEAEEE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGI
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GNDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AKISLDNLISKVDDMPVLPERINRIISLAEDPYSTVEELEKEILTDQSLTSKILKLANS
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
TYYGYARRIDTVSEAAVLLGAQAIKSLALASAVSEYLVKELPGGYGLEKYELWNQSQSCA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHH
IIARFIAKKLKYPKAEQAYVAGLIRDIGKTILNYYVAKEYQTIINKVDEDGKTFVEAEEE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ILGFNHGEVGAKIAEKWNFPLSLVESIRYHHSPELSKEDPKLVSIVHIADSITMMLGVGI
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GNDGLSYKFSDFVLETLNIKGEVIESIICESVDYLNDNDSFNII
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]