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The map label for this gene is 226948868

Identifier: 226948868

GI number: 226948868

Start: 1809833

End: 1810945

Strand: Direct

Name: 226948868

Synonym: CLM_1770

Alternate gene names: NA

Gene position: 1809833-1810945 (Clockwise)

Preceding gene: 226948867

Following gene: 226948870

Centisome position: 43.56

GC content: 27.04

Gene sequence:

>1113_bases
ATGGAAAAATTATCAATAGGTGAAGTTATTTATAGATTAAGAAAAGAAAAAGGTATTACCCAGGAGCAATTGGCAAATTT
TATTGGAGTATCCACAGCAGCAGTATCTAAATGGGAAAGTGAAACTTCATATCCAGACATAACATTATTACCAGTTATTG
CAATATTTTTTAATGTTACTATTGATACTTTATTAAATTTTAAAATTGAACTTTCAGATGAGGAAGTCATGGCCTTATTT
AGTGAGTGCGAAAAACTATTTAGCAGTGGTGAGTTGGGCAAAGCCATAGATAAAAGTAAGAAGTATATAATAAAGTATCC
ATCAAGTTATTATTTAAAGCTTAGGATTGGATGCTTATTTACTATGTATTCATGGAAAAGTATAGTTGAAGAAAAGAATA
TGAAGATGATAAAGTATTCCATTAAACTGTATGAAGATATAGCTAAAAATTGTAGAAAAATAGAATTAGTTGAGCAATCA
TTATTTCAACTTGGGGCATTATATCCATTAGTAGGAGAGGAAGATAAAGCTATAGAAGCTTTAAATAAAATTAATAAAAG
TGAGCTTGATCCCAATGTTTTACTTGCTAGTATATATATGGAGAAGAATGAATTAAAAAAAGCAAGAGAGATGATGCAAA
GCAAATTATACAAAAGTATTAATGATATAACTTTTGCATGTTTAGGATTGGCTAACTCCTATATGAAAGATGAAAAGAAT
TTATGTATGGTAGAAAAATATTATAACTTGTCAATTAACATTAAAAAAGTCTTTTCAACTGATGGAGAGTCTATACTAGG
ATTATCAATGGAGTATTTAAATTTTGTACAAATGTATTTGAAATTTAAAGATGGCGAGAAAGCATTAGGTATGTTACATA
AGATGGTAGAAGATATAAAAAAGTATGATATTAATGAACCAGAAAATTTTAGCTCTCTTTGGTGTTTTAATGAAATTCCA
AAAAGTAAACGAACTATAACTATGAATTTGTATGAAAATATATTTAAAATATTTGAAGCACCAGAATTTGATTTGATTAG
GGAAAGCAAAGAATTTATTTGTATAATGAATGATTTGAAAAATTTAGAGAAAAAATCTTTAAGGGGGAAGTAA

Upstream 100 bases:

>100_bases
TTTCTATAGTATATTCAACTATGAATCCATTGGTATATATATTGAAGTAAGATATACTAAGTACATAGGATCCTATAATG
ACTATAGGGAGTGATAAGTA

Downstream 100 bases:

>100_bases
AAATAGGATTATTAGTATTGAGGTGATTCAATAATGGAAAACTGACAAAACTTTGAATGCATTAAAAGATTTATCAGCTC
CTCTTGCATTTGCCTCATTA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein; HTH Domain-Containing Protein; HTH Motif Containing Protein; Transcriptional Regulatory Protein; HTH Domain Protein; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Xre Family; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MEKLSIGEVIYRLRKEKGITQEQLANFIGVSTAAVSKWESETSYPDITLLPVIAIFFNVTIDTLLNFKIELSDEEVMALF
SECEKLFSSGELGKAIDKSKKYIIKYPSSYYLKLRIGCLFTMYSWKSIVEEKNMKMIKYSIKLYEDIAKNCRKIELVEQS
LFQLGALYPLVGEEDKAIEALNKINKSELDPNVLLASIYMEKNELKKAREMMQSKLYKSINDITFACLGLANSYMKDEKN
LCMVEKYYNLSINIKKVFSTDGESILGLSMEYLNFVQMYLKFKDGEKALGMLHKMVEDIKKYDINEPENFSSLWCFNEIP
KSKRTITMNLYENIFKIFEAPEFDLIRESKEFICIMNDLKNLEKKSLRGK

Sequences:

>Translated_370_residues
MEKLSIGEVIYRLRKEKGITQEQLANFIGVSTAAVSKWESETSYPDITLLPVIAIFFNVTIDTLLNFKIELSDEEVMALF
SECEKLFSSGELGKAIDKSKKYIIKYPSSYYLKLRIGCLFTMYSWKSIVEEKNMKMIKYSIKLYEDIAKNCRKIELVEQS
LFQLGALYPLVGEEDKAIEALNKINKSELDPNVLLASIYMEKNELKKAREMMQSKLYKSINDITFACLGLANSYMKDEKN
LCMVEKYYNLSINIKKVFSTDGESILGLSMEYLNFVQMYLKFKDGEKALGMLHKMVEDIKKYDINEPENFSSLWCFNEIP
KSKRTITMNLYENIFKIFEAPEFDLIRESKEFICIMNDLKNLEKKSLRGK
>Mature_370_residues
MEKLSIGEVIYRLRKEKGITQEQLANFIGVSTAAVSKWESETSYPDITLLPVIAIFFNVTIDTLLNFKIELSDEEVMALF
SECEKLFSSGELGKAIDKSKKYIIKYPSSYYLKLRIGCLFTMYSWKSIVEEKNMKMIKYSIKLYEDIAKNCRKIELVEQS
LFQLGALYPLVGEEDKAIEALNKINKSELDPNVLLASIYMEKNELKKAREMMQSKLYKSINDITFACLGLANSYMKDEKN
LCMVEKYYNLSINIKKVFSTDGESILGLSMEYLNFVQMYLKFKDGEKALGMLHKMVEDIKKYDINEPENFSSLWCFNEIP
KSKRTITMNLYENIFKIFEAPEFDLIRESKEFICIMNDLKNLEKKSLRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43010; Mature: 43010

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLSIGEVIYRLRKEKGITQEQLANFIGVSTAAVSKWESETSYPDITLLPVIAIFFNVT
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IDTLLNFKIELSDEEVMALFSECEKLFSSGELGKAIDKSKKYIIKYPSSYYLKLRIGCLF
HHHHHCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCEEEEEEHHHHH
TMYSWKSIVEEKNMKMIKYSIKLYEDIAKNCRKIELVEQSLFQLGALYPLVGEEDKAIEA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LNKINKSELDPNVLLASIYMEKNELKKAREMMQSKLYKSINDITFACLGLANSYMKDEKN
HHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LCMVEKYYNLSINIKKVFSTDGESILGLSMEYLNFVQMYLKFKDGEKALGMLHKMVEDIK
EEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KYDINEPENFSSLWCFNEIPKSKRTITMNLYENIFKIFEAPEFDLIRESKEFICIMNDLK
HCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHHCCHHHEEEHHHHH
NLEKKSLRGK
HHHHHHCCCC
>Mature Secondary Structure
MEKLSIGEVIYRLRKEKGITQEQLANFIGVSTAAVSKWESETSYPDITLLPVIAIFFNVT
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IDTLLNFKIELSDEEVMALFSECEKLFSSGELGKAIDKSKKYIIKYPSSYYLKLRIGCLF
HHHHHCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCEEEEEEHHHHH
TMYSWKSIVEEKNMKMIKYSIKLYEDIAKNCRKIELVEQSLFQLGALYPLVGEEDKAIEA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LNKINKSELDPNVLLASIYMEKNELKKAREMMQSKLYKSINDITFACLGLANSYMKDEKN
HHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LCMVEKYYNLSINIKKVFSTDGESILGLSMEYLNFVQMYLKFKDGEKALGMLHKMVEDIK
EEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KYDINEPENFSSLWCFNEIPKSKRTITMNLYENIFKIFEAPEFDLIRESKEFICIMNDLK
HCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHHCCHHHEEEHHHHH
NLEKKSLRGK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA